RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 OR13C7P0DN81 318 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 LYNX1P0DP58 116 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 DDTP30046 118 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 RPL31P62899 125 aaKnown RBP12.12□□□□□ -0.47
MBD4-201ENST00000249910 SLC38A11Q08AI6 406 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 HAGHQ16775 308 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 NCMAPQ5T1S8 102 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 TMEM14EPQ6UXP3 125 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 C20orf24Q9BUV8 137 aa12.12□□□□□ -0.47
MBD4-201ENST00000249910 HPRT1P00492 218 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 ELLP55199 621 aaPredicted RBP12.11□□□□□ -0.47
MBD4-201ENST00000249910 TMEM106BQ9NUM4 274 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 PPIAL4EA0A075B759 164 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 TRAV38-1A0A0B4J264 116 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 PPIAL4DF5H284 164 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 SIAH2O43255 324 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 PPIAL4FP0DN26 164 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 CA7P43166 264 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 CEBPGP53567 150 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 UCNP55089 124 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 LY6DQ14210 128 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 CD300LFQ8TDQ1 290 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 H1FXQ92522 213 aaKnown RBP12.11□□□□□ -0.47
MBD4-201ENST00000249910 EGLN1Q9GZT9 426 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 NGBQ9NPG2 151 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 LAMP3Q9UQV4 416 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 PPIAL4AQ9Y536 164 aa12.11□□□□□ -0.47
MBD4-201ENST00000249910 TANC2Q9HCD6 1990 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 MRPS11P82912 194 aaKnown RBP12.1□□□□□ -0.47
MBD4-201ENST00000249910 PRDM13Q9H4Q3 707 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
MBD4-201ENST00000249910 RALYQ9UKM9 306 aaKnown RBP12.1□□□□□ -0.47
MBD4-201ENST00000249910 A0A087X0M5 115 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 A0A1B0GX30 115 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 IGKV1-16P04430 117 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 FGF8P55075 233 aaPredicted RBP12.1□□□□□ -0.47
MBD4-201ENST00000249910 KLRB1Q12918 225 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 PEA15Q15121 130 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 LRRC75BQ2VPJ9 315 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 SSX7Q7RTT5 188 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 TCTEX1D1Q8N7M0 179 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 DDB2Q92466 427 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 WDR61Q9GZS3 305 aaKnown RBP12.1□□□□□ -0.47
MBD4-201ENST00000249910 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
MBD4-201ENST00000249910 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 PMS2P5A8MQ11 134 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 HMGB3O15347 200 aaKnown RBP12.09□□□□□ -0.47
MBD4-201ENST00000249910 DEFA4P12838 97 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 MYOD1P15172 320 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 TMEM200BQ69YZ2 307 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 DIRC2Q96SL1 478 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 TMEM140Q9NV12 185 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 VSTM5A8MXK1 200 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 IGHV2-5P01817 119 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 CD3EP07766 207 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 RAB7AP51149 207 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 PRB3Q04118 309 aaPredicted RBP12.09□□□□□ -0.47
MBD4-201ENST00000249910 ZNF726P1Q15940 193 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 OR4A16Q8NH70 328 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 TAF15Q92804 592 aaKnown RBP eCLIP12.09□□□□□ -0.47
MBD4-201ENST00000249910 FAM122AQ96E09 287 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 CTSZQ9UBR2 303 aa12.09□□□□□ -0.47
MBD4-201ENST00000249910 MAP1AP78559 2803 aaPredicted RBP12.08□□□□□ -0.48
MBD4-201ENST00000249910 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
MBD4-201ENST00000249910 OPN1MWP04001 364 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 OPN1MW2P0DN77 364 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 OPN1MW3P0DN78 364 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 NQO2P16083 231 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 REG1BP48304 166 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 DLX1P56177 255 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 C1orf87Q8N0U7 546 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 OR10P1Q8NGE3 313 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 ZCCHC14Q8WYQ9 949 aaKnown RBP12.08□□□□□ -0.48
MBD4-201ENST00000249910 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
MBD4-201ENST00000249910 TET2Q6N021 2002 aaPredicted RBP12.08□□□□□ -0.48
MBD4-201ENST00000249910 RBFOX3A6NFN3 312 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 NKX6-3A6NJ46 265 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 HSBP1L1C9JCN9 74 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 IGKV1D-33P01593 117 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 IGKV1-33P01594 117 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 OR8U8P0C7N1 319 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 DAOP14920 347 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 APOBEC3AP31941 199 aaPredicted RBP12.08□□□□□ -0.48
MBD4-201ENST00000249910 ADORA2A-AS1P86434 159 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 ABHD12Q8N2K0 398 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 COMMD1Q8N668 190 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 MS4A5Q9H3V2 200 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 GOLT1BQ9Y3E0 138 aa12.08□□□□□ -0.48
MBD4-201ENST00000249910 DVL1O14640 695 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 LINC00614P0C842 121 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 ERVK-16P61578 105 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 PKIAP61925 76 aa12.07□□□□□ -0.48
MBD4-201ENST00000249910 RELBQ01201 579 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms