RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TCF19Q9Y242 345 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 TRAV38-1A0A0B4J264 116 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 LY86O95711 162 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 RPP30P78346 268 aaKnown RBP16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 C1orf87Q8N0U7 546 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 LYG1Q8N1E2 194 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZNF383Q8NA42 475 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 DOK5Q9P104 306 aa16.07■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BKO60814 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 S100A9P06702 114 aaKnown RBP16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BJP06899 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HOXA5P20719 270 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BOP23527 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BBP33778 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BDP58876 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BCP62807 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST2H2BEQ16778 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZNF788Q6ZQV5 615 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BHQ93079 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 RHOVQ96L33 236 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BNQ99877 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 HIST1H2BMQ99879 126 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 MS4A5Q9H3V2 200 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZGRF1Q86YA3 2104 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 A0A0G2JNJ9 132 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 C15orf61A6NNL5 157 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 SEC14L6B5MCN3 397 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 GNG10P50151 68 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 NDUFA6P56556 154 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 RPL23P62829 140 aaKnown RBP16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 OR4A47Q6IF82 309 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 Q9UFV3 132 aa16.06■□□□□ 0.16
CDC42EP1-201ENST00000249014 IFITM10A6NMD0 228 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 TMPRSS3P57727 454 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 MRPS11P82912 194 aaKnown RBP16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 DOLPP1Q86YN1 238 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 NUP37Q8NFH4 326 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 MGST2Q99735 147 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 TCEAL7Q9BRU2 100 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 CTDSP1Q9GZU7 261 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 RAB9BQ9NP90 201 aa16.05■□□□□ 0.16
CDC42EP1-201ENST00000249014 TNFSF4P23510 183 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 THBS3P49746 956 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 CCL8P80075 99 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 SPNS3Q6ZMD2 512 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 C1orf159Q96HA4 380 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 PATZ1Q9HBE1 687 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 IDI2-AS1Q9NZ38 188 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 TRGV8A0A0C4DH27 118 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 MYOD1P15172 320 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 NPPCP23582 126 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 BSXQ3C1V8 233 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 C16orf82Q7Z2V1 217 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 OR13D1Q8NGV5 346 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZCCHC14Q8WYQ9 949 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 GGACTQ9BVM4 153 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZNRD1Q9P1U0 126 aa16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 MAP1BP46821 2468 aaKnown RBP16.04■□□□□ 0.16
CDC42EP1-201ENST00000249014 TRBV24-1A0A075B6N3 115 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 MPDU1O75352 247 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 OPN1MWP04001 364 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 OPN1MW2P0DN77 364 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 OPN1MW3P0DN78 364 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 OPRK1P41145 380 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 TDGF1P3P51864 188 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZCCHC24Q8N2G6 241 aaKnown RBP16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 ABHD5Q8WTS1 349 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 ABHD17AQ96GS6 310 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 GGTLC1Q9BX51 225 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 LINC00574Q9H8X3 128 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 TMEM14BQ9NUH8 114 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 DMXL2Q8TDJ6 3036 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 ZNF729A6NN14 1252 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 C11orf94C9JXX5 98 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 TEX36Q5VZQ5 186 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 MIC13Q5XKP0 118 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 TMEM108Q6UXF1 575 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 WFDC8Q8IUA0 241 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 RAB1CQ92928 201 aa16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 NEIL1Q96FI4 390 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 FOXA2Q9Y261 457 aaPredicted RBP16.03■□□□□ 0.16
CDC42EP1-201ENST00000249014 DPRXA6NFQ7 191 aa16.02■□□□□ 0.16
CDC42EP1-201ENST00000249014 CDX1P47902 265 aaPredicted RBP16.02■□□□□ 0.16
CDC42EP1-201ENST00000249014 FRZBQ92765 325 aa16.02■□□□□ 0.16
CDC42EP1-201ENST00000249014 CORO2AQ92828 525 aa16.02■□□□□ 0.16
CDC42EP1-201ENST00000249014 NIT2Q9NQR4 276 aa16.02■□□□□ 0.16
CDC42EP1-201ENST00000249014 C16orf97H3BN30 126 aa16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 MKRN2OSH3BPM6 223 aa16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 PHOX2AO14813 284 aa16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 NDUFS6O75380 124 aaKnown RBP16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 IRF2P14316 349 aa16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 S100A12P80511 92 aa16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 ARSJQ5FYB0 599 aaPredicted RBP16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 PXMP4Q9Y6I8 212 aa16.02■□□□□ 0.15
CDC42EP1-201ENST00000249014 A0A1W2PPV4 95 aa16.01■□□□□ 0.15
CDC42EP1-201ENST00000249014 TMPRSS2O15393 492 aa16.01■□□□□ 0.15
CDC42EP1-201ENST00000249014 PFN1P07737 140 aaKnown RBP16.01■□□□□ 0.15
CDC42EP1-201ENST00000249014 TRGC1P0CF51 173 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms