RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 SPIN2BQ9BPZ2 258 aa18.93■□□□□ 0.62
SDF2L1-201ENST00000248958 GNB4Q9HAV0 340 aa18.93■□□□□ 0.62
SDF2L1-201ENST00000248958 PLEKHA2Q9HB19 425 aa18.93■□□□□ 0.62
SDF2L1-201ENST00000248958 BET1LQ9NYM9 111 aa18.93■□□□□ 0.62
SDF2L1-201ENST00000248958 RSL24D1Q9UHA3 163 aaKnown RBP18.93■□□□□ 0.62
SDF2L1-201ENST00000248958 MSGN1A6NI15 193 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 I3L521 148 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 ZNF701M0R085 212 aaPredicted RBP18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 IGLL1P15814 213 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 NQO2P16083 231 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 TPPP2P59282 170 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 POU2AF1Q16633 256 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 SLC38A6Q8IZM9 456 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 VKORC1L1Q8N0U8 176 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 OR11H1Q8NG94 326 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 RSRP1Q9BUV0 290 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 ZNF355PQ9NSJ1 428 aa18.92■□□□□ 0.62
SDF2L1-201ENST00000248958 RLN1P04808 185 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 F2RP25116 425 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 FHL3Q13643 280 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 DEFB136Q30KP8 78 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 ASPHD1Q5U4P2 390 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 OR5T1Q8NG75 326 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 SMIM4Q8WVI0 70 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 DUX3Q96PT4 197 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 RBM38Q9H0Z9 239 aaKnown RBP18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 COMMD9Q9P000 198 aa18.91■□□□□ 0.62
SDF2L1-201ENST00000248958 M0QYG6 137 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 MPPED1O15442 326 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 TRGV3P03979 118 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 CD74P04233 296 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 CD3DP04234 171 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 OR8U8P0C7N1 319 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 DGCR2P98153 550 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 OR1N2Q8NGR9 330 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 DGCR14Q96DF8 476 aaKnown RBP18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 MS4A10Q96PG2 267 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 FAM212BQ9NTI7 297 aaPredicted RBP18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 TNCP24821 2201 aa18.9■□□□□ 0.62
SDF2L1-201ENST00000248958 A0A0G2JLM5 398 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 FGF2P09038 288 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 LGALS1P09382 135 aaKnown RBP18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 OR9G9P0C7N8 305 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 ZNF616Q08AN1 781 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 SSX9Q7RTT3 188 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 SLC25A42Q86VD7 318 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 LHFPL1Q86WI0 220 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 CASTOR1Q8WTX7 329 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 DPF1Q92782 380 aa18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 ZNF486Q96H40 463 aaPredicted RBP18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 TINAGL1Q9GZM7 467 aaPredicted RBP18.89■□□□□ 0.61
SDF2L1-201ENST00000248958 RAB3DO95716 219 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 RPL27AP46776 148 aaKnown RBP18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 RAB25P57735 213 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 ERVK-16P61578 105 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 RPL8P62917 257 aaKnown RBP18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 OR4A47Q6IF82 309 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 STEAP1BQ6NZ63 245 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 REC114Q7Z4M0 266 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 OR5B12Q96R08 314 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 HRASLSQ9HDD0 168 aa18.88■□□□□ 0.61
SDF2L1-201ENST00000248958 TNFSF8P32971 234 aa18.87■□□□□ 0.61
SDF2L1-201ENST00000248958 MEF2DQ14814 521 aa18.87■□□□□ 0.61
SDF2L1-201ENST00000248958 PHLDA2Q53GA4 152 aa18.87■□□□□ 0.61
SDF2L1-201ENST00000248958 CADM3Q8N126 398 aa18.87■□□□□ 0.61
SDF2L1-201ENST00000248958 DMBX1Q8NFW5 382 aa18.87■□□□□ 0.61
SDF2L1-201ENST00000248958 COA4Q9NYJ1 87 aa18.87■□□□□ 0.61
SDF2L1-201ENST00000248958 C13orf42A0A1B0GVH6 325 aa18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 FABP12A6NFH5 140 aa18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 GSTZ1O43708 216 aaPredicted RBP18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 S1PR2O95136 353 aa18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 IL6RP08887 468 aaPredicted RBP18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 PDLIM3Q53GG5 364 aaPredicted RBP18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 FOXB2Q5VYV0 432 aa18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 TTC9CQ8N5M4 171 aa18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 ADAD2Q8NCV1 583 aaKnown RBP18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 USMG5Q96IX5 58 aa18.86■□□□□ 0.61
SDF2L1-201ENST00000248958 LINC01619G3V211 115 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 UPK2O00526 184 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 HSPB1P04792 205 aaKnown RBP18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 PGAM2P15259 253 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 HLA-GP17693 338 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 S100A5P33763 92 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 ECI1P42126 302 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 LPAR6P43657 344 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 RND3P61587 244 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 C10orf55Q5SWW7 151 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 TBC1D26Q86UD7 250 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 TERB2Q8NHR7 220 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 SOSTQ9BQB4 213 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 SLC2A9Q9NRM0 540 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 TMEM140Q9NV12 185 aa18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 ZMAT5Q9UDW3 170 aaKnown RBP18.85■□□□□ 0.61
SDF2L1-201ENST00000248958 MARCH11A6NNE9 402 aa18.84■□□□□ 0.61
SDF2L1-201ENST00000248958 DISC1C4P0D8 188 aa18.84■□□□□ 0.61
SDF2L1-201ENST00000248958 ZNF735P0CB33 412 aa18.84■□□□□ 0.61
SDF2L1-201ENST00000248958 APELAP0DMC3 54 aa18.84■□□□□ 0.61
SDF2L1-201ENST00000248958 PTBP1P26599 531 aaKnown RBP eCLIP18.84■□□□□ 0.61
SDF2L1-201ENST00000248958 ZFAND1Q8TCF1 268 aa18.84■□□□□ 0.61
SDF2L1-201ENST00000248958 ZNF257Q9Y2Q1 563 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms