RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 RPL39P5Q59GN2 51 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 CHRNA10Q9GZZ6 450 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 H3BTX0 84 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BKO60814 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BJP06899 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BOP23527 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BBP33778 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BDP58876 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BCP62807 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST2H2BEQ16778 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.86■□□□□ 0.29
SOX4-201ENST00000244745 ZNF441Q8N8Z8 693 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BHQ93079 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 NEU1Q99519 415 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BNQ99877 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H2BMQ99879 126 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 PMCHL2Q9BQD1 86 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 LOC107984156A0A0G2JMH3 177 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 CYP2G1PQ6ZSU1 146 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 ARL17AQ8IVW1 177 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 SSBP3Q9BWW4 388 aaPredicted RBP16.86■□□□□ 0.29
SOX4-201ENST00000244745 RTN4RQ9BZR6 473 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 IL36BQ9NZH7 164 aa16.86■□□□□ 0.29
SOX4-201ENST00000244745 TDRD6O60522 2096 aaKnown RBP16.86■□□□□ 0.29
SOX4-201ENST00000244745 SPAG17Q6Q759 2223 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 A0A0G2JMM0 328 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 A0A1W2PPB8 328 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 A0A1W2PRS3 328 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 COLCA2A8K830 154 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 KIR3DP1A8MWS1 328 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 SLC17A3O00476 420 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 PEF1Q9UBV8 284 aaKnown RBP16.85■□□□□ 0.29
SOX4-201ENST00000244745 CELA3AP09093 270 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 PTGDSP41222 190 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 SPANXN1Q5VSR9 72 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 RBPMS2Q6ZRY4 209 aaKnown RBP16.85■□□□□ 0.29
SOX4-201ENST00000244745 KCNS1Q96KK3 526 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 LYZL4Q96KX0 146 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 SCNM1Q9BWG6 230 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 HSPB7Q9UBY9 170 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 SLC25A17O43808 307 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 SELENOTP62341 195 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 ST6GALNAC6Q969X2 333 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 NABP2Q9BQ15 211 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 A0A0A6YYD4 124 aa16.85■□□□□ 0.29
SOX4-201ENST00000244745 ALKBH7Q9BT30 221 aaPredicted RBP16.85■□□□□ 0.29
SOX4-201ENST00000244745 DIRC2Q96SL1 478 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 M0R3E3 92 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 CKS2P33552 79 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 IL6RP08887 468 aaPredicted RBP16.84■□□□□ 0.29
SOX4-201ENST00000244745 MC5RP33032 325 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 HEPN1Q6WQI6 88 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 H0YIZ8 118 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 IGHV3-48P01763 117 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 HTN1P15515 57 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 HIST1H4GQ99525 98 aa16.84■□□□□ 0.29
SOX4-201ENST00000244745 RRHO14718 337 aa16.83■□□□□ 0.29
SOX4-201ENST00000244745 FADS6Q8N9I5 356 aa16.83■□□□□ 0.29
SOX4-201ENST00000244745 LINC00470Q9BZP3 86 aa16.83■□□□□ 0.29
SOX4-201ENST00000244745 TMEM238LA0A1B0GVL6 79 aa16.83■□□□□ 0.29
SOX4-201ENST00000244745 A6NJY4 79 aa16.83■□□□□ 0.29
SOX4-201ENST00000244745 TMEM170AQ8WVE7 144 aa16.83■□□□□ 0.29
SOX4-201ENST00000244745 AHRRA9YTQ3 701 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 TNFSF10P50591 281 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 ZNF146Q15072 292 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 SLC25A53Q5H9E4 307 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 PPP1R32Q7Z5V6 425 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 WFDC3Q8IUB2 231 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 ZNF502Q8TBZ5 544 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 UCP1P25874 307 aa16.83■□□□□ 0.28
SOX4-201ENST00000244745 SIGLEC12Q96PQ1 595 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 TMEM70Q9BUB7 260 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 PAQR4Q8N4S7 273 aaPredicted RBP16.82■□□□□ 0.28
SOX4-201ENST00000244745 OR1N2Q8NGR9 330 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 OR10AG1Q8NH19 301 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 LPAR2Q9HBW0 351 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 PLSCR2Q9NRY7 297 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 SCO2A0A1W2PP80 73 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 ERASQ7Z444 233 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 SPTBP11277 2137 aa16.82■□□□□ 0.28
SOX4-201ENST00000244745 C17orf98A8MV24 154 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 PCSK4Q6UW60 755 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 ZSWIM8A7E2V4 1837 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 C12orf77C9JDV5 145 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 H7C2G1 150 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 RPL23P62829 140 aaKnown RBP16.81■□□□□ 0.28
SOX4-201ENST00000244745 IGKV1-9A0A0C4DH69 117 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 ADMP35318 185 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 ATP5G3P48201 142 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 TMEM208Q9BTX3 173 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 C1QTNF5Q9BXJ0 243 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 TIMP4Q99727 224 aa16.81■□□□□ 0.28
SOX4-201ENST00000244745 CGB1A6NKQ9 187 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 A6NNC1 897 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 FCGR2BP31994 310 aaPredicted RBP16.8■□□□□ 0.28
SOX4-201ENST00000244745 NIT1Q86X76 327 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 OR4A5Q8NH83 315 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 SCN8AQ9UQD0 1980 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 GFI1BQ5VTD9 330 aa16.8■□□□□ 0.28
SOX4-201ENST00000244745 ACP7Q6ZNF0 438 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms