RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 RPL39P5Q59GN2 51 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 CXorf66Q5JRM2 361 aaPredicted RBP10.74□□□□□ -0.69
SLIRP-201ENST00000238688 OR8H3Q8N146 312 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 ABHD12Q8N2K0 398 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 C11orf42Q8N5U0 333 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 OR4C13Q8NGP0 309 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 RNF5Q99942 180 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 ARV1Q9H2C2 271 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 SLC35D1Q9NTN3 355 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 PRNDQ9UKY0 176 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 ZNF257Q9Y2Q1 563 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 STAB1Q9NY15 2570 aa10.74□□□□□ -0.69
SLIRP-201ENST00000238688 IGHV2-26A0A0B4J1V2 119 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 IGHV4-61A0A0C4DH41 118 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 NUDT19A8MXV4 375 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 OOSP1A8MZH6 123 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 CHST1O43916 411 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 ATP6V1G1O75348 118 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 FOXH1O75593 365 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 MMP23AO75900 390 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 SPDEFO95238 335 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 PRTN3P24158 256 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 G6PCP35575 357 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 CEACAM3P40198 252 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 GNG10P50151 68 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 RAB5CP51148 216 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 CAV2P51636 162 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 EWSR1Q01844 656 aaKnown RBP eCLIP10.73□□□□□ -0.69
SLIRP-201ENST00000238688 HLA-DRB5Q30154 266 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 TMEM177Q53S58 311 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 AVPI1Q5T686 147 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 Q6ZRM9 215 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 TGIF2LXQ8IUE1 241 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 TMEM252Q8N6L7 170 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 ZNF383Q8NA42 475 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 OR11H6Q8NGC7 330 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 OR4A16Q8NH70 328 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 RHOVQ96L33 236 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 PARD6GQ9BYG4 376 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-201ENST00000238688 CYTL1Q9NRR1 136 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 BET1LQ9NYM9 111 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 FBXL17Q9UF56 701 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 FOXA2Q9Y261 457 aaPredicted RBP10.73□□□□□ -0.69
SLIRP-201ENST00000238688 WASHC3Q9Y3C0 194 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 AUP1Q9Y679 476 aa10.73□□□□□ -0.69
SLIRP-201ENST00000238688 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 SOX15O60248 233 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 CFDP00746 253 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-201ENST00000238688 SEC11BP0C7V7 166 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 CT45A6P0DMU7 189 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 CT45A5P0DMU8 189 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 CT45A7P0DMV0 189 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 LGALS7P47929 136 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 ATP6V1FQ16864 119 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 FAM53AQ6NSI3 398 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-201ENST00000238688 PDZD9Q8IXQ8 264 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 RNF141Q8WVD5 230 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 SAT2Q96F10 170 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-201ENST00000238688 TSNAXQ99598 290 aaKnown RBP10.72□□□□□ -0.69
SLIRP-201ENST00000238688 PIMREGQ9BSJ6 248 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 TMEM160Q9NX00 188 aa10.72□□□□□ -0.69
SLIRP-201ENST00000238688 C15orf61A6NNL5 157 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 H0YJW9 148 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 CRYZL1O95825 349 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 IL6RP08887 468 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-201ENST00000238688 OR2B11Q5JQS5 317 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 CYB5R2Q6BCY4 276 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 CCDC144NLQ6NUI1 221 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 MRPL41Q8IXM3 137 aaKnown RBP10.71□□□□□ -0.69
SLIRP-201ENST00000238688 OR1S2Q8NGQ3 325 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 OR5B3Q8NH48 314 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 LEAP2Q969E1 77 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 PINX1Q96BK5 328 aaKnown RBP10.71□□□□□ -0.69
SLIRP-201ENST00000238688 GNPNAT1Q96EK6 184 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-201ENST00000238688 GINS3Q9BRX5 216 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 BPESC1Q9GZL8 116 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 TMEM14BQ9NUH8 114 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 TMEM140Q9NV12 185 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 WNK2Q9Y3S1 2297 aa10.71□□□□□ -0.69
SLIRP-201ENST00000238688 MEX3AA1L020 520 aaKnown RBP10.7□□□□□ -0.7
SLIRP-201ENST00000238688 UMAD1C9J7I0 102 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 INS-IGF2F8WCM5 200 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 RBMXL2O75526 392 aaKnown RBP10.7□□□□□ -0.7
SLIRP-201ENST00000238688 OR8U8P0C7N1 319 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 PAX9P55771 341 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 MINOS1Q5TGZ0 78 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 ALKAL2Q6UX46 152 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 TMEM14EPQ6UXP3 125 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 DTD1Q8TEA8 209 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 LHX4Q969G2 390 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 FLYWCH2Q96CP2 140 aaKnown RBP10.7□□□□□ -0.7
SLIRP-201ENST00000238688 ATP5SQ99766 215 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 NABP2Q9BQ15 211 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 GGACTQ9BVM4 153 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 PSENENQ9NZ42 101 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 STRAPQ9Y3F4 350 aaKnown RBP10.7□□□□□ -0.7
SLIRP-201ENST00000238688 MINOS1-NBL1R4GNA1 71 aa10.7□□□□□ -0.7
SLIRP-201ENST00000238688 ARHGAP32A7KAX9 2087 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms