RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 IFNA17P01571 189 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 NMBP08949 121 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 SAA1P0DJI8 122 aaPredicted RBP12.3□□□□□ -0.44
HDHD3-201ENST00000238379 HTR1DP28221 377 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 DYNLT3P51808 116 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 TMEM267Q0VDI3 215 aaPredicted RBP12.3□□□□□ -0.44
HDHD3-201ENST00000238379 SPINK9Q5DT21 86 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 STX12Q86Y82 276 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 PUSL1Q8N0Z8 303 aaKnown RBP12.3□□□□□ -0.44
HDHD3-201ENST00000238379 TMEM217Q8N7C4 229 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 OR5C1Q8NGR4 320 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 RPEQ96AT9 228 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 CIB3Q96Q77 187 aaPredicted RBP12.3□□□□□ -0.44
HDHD3-201ENST00000238379 BET1LQ9NYM9 111 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 CACFD1Q9UGQ2 172 aa12.3□□□□□ -0.44
HDHD3-201ENST00000238379 WNK2Q9Y3S1 2297 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 IGHV3-72A0A0B4J1Y9 119 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 RNASEK-C17orf49H0YIS7 233 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 METTL15P1P0C7V9 234 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 KRTAP10-9P60411 292 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 CLINT1Q14677 625 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 TMEM14EPQ6UXP3 125 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 TMED6Q8WW62 240 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 MS4A7Q9GZW8 240 aaPredicted RBP12.29□□□□□ -0.44
HDHD3-201ENST00000238379 DPM3Q9P2X0 92 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 ITGB1BP2Q9UKP3 347 aa12.29□□□□□ -0.44
HDHD3-201ENST00000238379 BORCS7-ASMTA0A0B4J1R7 106 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 LEUTXA8MZ59 168 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 IGLV2-23P01705 113 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 RPS16P62249 146 aaKnown RBP12.28□□□□□ -0.44
HDHD3-201ENST00000238379 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 TPTE2P1Q5T6R2 138 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 HAPLN4Q86UW8 402 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 RITA1Q96K30 269 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 OR4C12Q96R67 309 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 TCF19Q9Y242 345 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 POLQO75417 2590 aa12.28□□□□□ -0.44
HDHD3-201ENST00000238379 HELZ2Q9BYK8 2649 aaKnown RBP12.28□□□□□ -0.44
HDHD3-201ENST00000238379 A0A1W2PPI3 338 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 LINC00862A6NCI5 91 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 KBTBD11O94819 623 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 HOXB4P17483 251 aaPredicted RBP12.27□□□□□ -0.44
HDHD3-201ENST00000238379 VDAC2P45880 294 aaPredicted RBP12.27□□□□□ -0.44
HDHD3-201ENST00000238379 DVL1P1P54792 670 aaPredicted RBP12.27□□□□□ -0.44
HDHD3-201ENST00000238379 DSCR9P59020 149 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 HSPE1P61604 102 aaKnown RBP12.27□□□□□ -0.44
HDHD3-201ENST00000238379 MOB3BQ86TA1 216 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 STPG2Q8N412 459 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 OR1S2Q8NGQ3 325 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 TBX15Q96SF7 602 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 SLC25A32Q9H2D1 315 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 NUP50Q9UKX7 468 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 PRNDQ9UKY0 176 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.44
HDHD3-201ENST00000238379 ABCA2Q9BZC7 2435 aa12.27□□□□□ -0.44
HDHD3-201ENST00000238379 TNCP24821 2201 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 TOX4O94842 621 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 LY86O95711 162 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 LGALS7P47929 136 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 LHFPL4Q7Z7J7 247 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 PDZD9Q8IXQ8 264 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 GINS3Q9BRX5 216 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 LPAR2Q9HBW0 351 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 ZNF257Q9Y2Q1 563 aa12.27□□□□□ -0.45
HDHD3-201ENST00000238379 STRAPQ9Y3F4 350 aaKnown RBP12.27□□□□□ -0.45
HDHD3-201ENST00000238379 MYOD1P15172 320 aa12.26□□□□□ -0.45
HDHD3-201ENST00000238379 CEACAM3P40198 252 aa12.26□□□□□ -0.45
HDHD3-201ENST00000238379 ZNF266Q14584 549 aa12.26□□□□□ -0.45
HDHD3-201ENST00000238379 EIF5AL1Q6IS14 154 aaKnown RBP12.26□□□□□ -0.45
HDHD3-201ENST00000238379 TMEM167AQ8TBQ9 72 aa12.26□□□□□ -0.45
HDHD3-201ENST00000238379 OR51B2Q9Y5P1 312 aa12.26□□□□□ -0.45
HDHD3-201ENST00000238379 ABCA12Q86UK0 2595 aa12.26□□□□□ -0.45
HDHD3-201ENST00000238379 ANKRD17O75179 2603 aaKnown RBP12.26□□□□□ -0.45
HDHD3-201ENST00000238379 A0A1W2PRD5 423 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 A0A1W2PRF3 423 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 A0A1W2PRM7 423 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 PMS2P5A8MQ11 134 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 FBXO24O75426 580 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 FAM157CP0CG43 387 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 HBG1P69891 147 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 HBG2P69892 147 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 OR4A5Q8NH83 315 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 VSTM2AQ8TAG5 236 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 PSMG3-AS1Q96PY0 264 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 ATP5SQ99766 215 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 PLA2G2EQ9NZK7 142 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 HILPDAQ9Y5L2 63 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 DOPEY2Q9Y3R5 2298 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 TEX50A0A1B0GTY4 177 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 C15orf62A8K5M9 175 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 TIMM23O14925 209 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 SPP1P10451 314 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 USF1P22415 310 aaPredicted RBP12.25□□□□□ -0.45
HDHD3-201ENST00000238379 HABP2Q14520 560 aaPredicted RBP12.25□□□□□ -0.45
HDHD3-201ENST00000238379 CLEC12BQ2HXU8 276 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 HIPK2Q9H2X6 1198 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 HEYLQ9NQ87 328 aaPredicted RBP12.25□□□□□ -0.45
HDHD3-201ENST00000238379 FKBP11Q9NYL4 201 aa12.25□□□□□ -0.45
HDHD3-201ENST00000238379 AUP1Q9Y679 476 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms