RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 FAM74A7A6NL05 159 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 LY6HO94772 140 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 IFNA17P01571 189 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 SOD3P08294 240 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 FAM74A3Q4VXF1 159 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 C11orf42Q8N5U0 333 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 OR10P1Q8NGE3 313 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
ITGA4-201ENST00000233573 A0A087X0M5 115 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 A0A1B0GV50 99 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 A0A1B0GX30 115 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 TLE4Q04727 773 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 LINC00311Q8N616 119 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 EIF5A2Q9GZV4 153 aaKnown RBP13.03□□□□□ -0.32
ITGA4-201ENST00000233573 TMEM14BQ9NUH8 114 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
ITGA4-201ENST00000233573 FOXA2Q9Y261 457 aaPredicted RBP13.03□□□□□ -0.32
ITGA4-201ENST00000233573 IGHV2-70P01814 119 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 NPBWR1P48145 328 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 ZNF726P1Q15940 193 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 DHRS7BQ6IAN0 325 aaPredicted RBP13.02□□□□□ -0.33
ITGA4-201ENST00000233573 ZNF841Q6ZN19 808 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 PBDC1Q9BVG4 233 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 TCF19Q9Y242 345 aa13.02□□□□□ -0.33
ITGA4-201ENST00000233573 NUPL2O15504 423 aaKnown RBP13.01□□□□□ -0.33
ITGA4-201ENST00000233573 SNAPINO95295 136 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 HRASP01112 189 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 PPT1P50897 306 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 RPS16P62249 146 aaKnown RBP13.01□□□□□ -0.33
ITGA4-201ENST00000233573 IQCF2Q8IXL9 164 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 TMEM170AQ8WVE7 144 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 RARRES2Q99969 163 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 SMDT1Q9H4I9 107 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 KPTNQ9Y664 436 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 DOPEY1Q5JWR5 2465 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 SRRM4A7MD48 611 aaKnown RBP13.01□□□□□ -0.33
ITGA4-201ENST00000233573 PRSS46E5RG02 174 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 IGFBP2P18065 325 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 C11orf71Q6IPW1 123 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 SSX7Q7RTT5 188 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 OR13D1Q8NGV5 346 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 MBD3L1Q8WWY6 194 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 MRPL20Q9BYC9 149 aaKnown RBP13.01□□□□□ -0.33
ITGA4-201ENST00000233573 SLC35D1Q9NTN3 355 aa13.01□□□□□ -0.33
ITGA4-201ENST00000233573 TRBV23-1A0A0A0MS06 115 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 RBFOX3A6NFN3 312 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 J3QR06 171 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
ITGA4-201ENST00000233573 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 FAM71F2Q6NXP2 309 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 OR5AN1Q8NGI8 311 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 ST6GALNAC6Q969X2 333 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 CBLN4Q9NTU7 201 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 IGHV1-8P0DP01 117 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 ZNF137PP52743 207 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 HSPE1P61604 102 aaKnown RBP13□□□□□ -0.33
ITGA4-201ENST00000233573 RTL8BQ17RB0 113 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 Q8N7P7 452 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 RAB39BQ96DA2 213 aa13□□□□□ -0.33
ITGA4-201ENST00000233573 RCC1LQ96I51 464 aaKnown RBP13□□□□□ -0.33
ITGA4-201ENST00000233573 H0YJW9 148 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 RRHO14718 337 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 IGKV1D-33P01593 117 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 IGKV1-33P01594 117 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 HBE1P02100 147 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 CLDND2Q8NHS1 167 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 SLC35B3Q9H1N7 401 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 UBTD1Q9HAC8 227 aa12.99□□□□□ -0.33
ITGA4-201ENST00000233573 UPK2O00526 184 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 CTRB1P17538 263 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 FGF7P21781 194 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 RPP30P78346 268 aaKnown RBP12.98□□□□□ -0.33
ITGA4-201ENST00000233573 DIAPH2-AS1Q14236 149 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 ZNF506Q5JVG8 444 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 CTRB2Q6GPI1 263 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 ACSM6Q6P461 480 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 CLRN3Q8NCR9 226 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 TMEM186Q96B77 213 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 HEYLQ9NQ87 328 aaPredicted RBP12.98□□□□□ -0.33
ITGA4-201ENST00000233573 AKAP6Q13023 2319 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 TSPAN4O14817 238 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 IFNA10P01566 189 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 ICAM4Q14773 271 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 ABHD12Q8N2K0 398 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
ITGA4-201ENST00000233573 OR9G1Q8NH87 305 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 OSR1Q8TAX0 266 aaPredicted RBP12.98□□□□□ -0.33
ITGA4-201ENST00000233573 CLCC1Q96S66 551 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 BET1LQ9NYM9 111 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 WDR83OSQ9Y284 106 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 ZNF257Q9Y2Q1 563 aa12.98□□□□□ -0.33
ITGA4-201ENST00000233573 MYOD1P15172 320 aa12.97□□□□□ -0.33
ITGA4-201ENST00000233573 ELLP55199 621 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms