RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CLEC1BQ9P126 229 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 C7orf71A4D174 169 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 PPIHO43447 177 aaKnown RBP7.05□□□□□ -1.28
APOB-201ENST00000233242 MS4A6AQ9H2W1 248 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 RPP21Q9H633 154 aaKnown RBP7.05□□□□□ -1.28
APOB-201ENST00000233242 FOXD3Q9UJU5 478 aaPredicted RBP7.05□□□□□ -1.28
APOB-201ENST00000233242 CACNG8Q8WXS5 425 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 AKIRIN1Q9H9L7 192 aaPredicted RBP7.05□□□□□ -1.28
APOB-201ENST00000233242 DLEU1O43261 78 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 SS18L1O75177 396 aaPredicted RBP7.05□□□□□ -1.28
APOB-201ENST00000233242 RTBDNQ9BSG5 229 aaPredicted RBP7.05□□□□□ -1.28
APOB-201ENST00000233242 PHLDA3Q9Y5J5 127 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 TRBV6-7A0A0A0MS04 114 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 UCN2Q96RP3 112 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 GNB1LQ9BYB4 327 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 WBP1LQ9NX94 342 aa7.05□□□□□ -1.28
APOB-201ENST00000233242 PCNX1Q96RV3 2341 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 FOXS1O43638 330 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 IGHV3-13P01766 116 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 IGHV3-7P01780 117 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 FMC1Q96HJ9 113 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 JPT1Q9UK76 154 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 RND2P52198 227 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 CHD3Q12873 2000 aaKnown RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 SRSF5Q13243 272 aaKnown RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 SRSF12Q8WXF0 261 aaKnown RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 NEU1Q99519 415 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 ELOVL5Q9NYP7 299 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 ODAMA1E959 279 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 RTN4RQ9BZR6 473 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 SHISA3A0PJX4 238 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 CIARTQ8N365 385 aaPredicted RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 AMELYQ99218 206 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 MMDQ15546 238 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 TIMM23BQ5SRD1 257 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 TSPAN2O60636 221 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 PSG4Q00888 419 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 LY6G6FQ5SQ64 297 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 C10orf128Q5T292 105 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 PLPPR1Q8TBJ4 325 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 NABP2Q9BQ15 211 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 SLC25A10Q9UBX3 287 aaPredicted RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 C21orf140B9A014 251 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 TMEM50AO95807 157 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 FHL5Q5TD97 284 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 TRAV39A0A0B4J263 110 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 DLL3Q9NYJ7 618 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 IGKV1-8A0A0C4DH67 115 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 PGPEP1LA6NFU8 196 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 GDF9O60383 454 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 P2RY6Q15077 328 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 CHCHD1Q96BP2 118 aaKnown RBP7.04□□□□□ -1.28
APOB-201ENST00000233242 OR9G4Q8NGQ1 327 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 OSTCQ9NRP0 149 aa7.04□□□□□ -1.28
APOB-201ENST00000233242 PRSS8Q16651 343 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 DTX4Q9Y2E6 619 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 ZG16O60844 167 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 AMBPP02760 352 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 C16orf47Q6ZP98 133 aaPredicted RBP7.03□□□□□ -1.28
APOB-201ENST00000233242 OR4C13Q8NGP0 309 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 GTF3AQ92664 365 aaKnown RBP7.03□□□□□ -1.28
APOB-201ENST00000233242 LHX9Q9NQ69 397 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 OR2K2Q8NGT1 345 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 SSBP4Q9BWG4 385 aaPredicted RBP7.03□□□□□ -1.28
APOB-201ENST00000233242 REG4Q9BYZ8 158 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 DEFB109BQ30KR1 87 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 CTHRC1Q96CG8 243 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 MS4A5Q9H3V2 200 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 RASL11AQ6T310 242 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 PEX7O00628 323 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 HSD52Q0P140 79 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 ASPHD2Q6ICH7 369 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 HEATR5AQ86XA9 2040 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 H3BUT2 72 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 KRTCAP3Q53RY4 240 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 ABCA7Q8IZY2 2146 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 MBNL2Q5VZF2 373 aaKnown RBP7.03□□□□□ -1.28
APOB-201ENST00000233242 DLX6P56179 175 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 MDP1Q86V88 176 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 SFTPCP11686 197 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 ORMDL3Q8N138 153 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 RNF126Q9BV68 326 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 DOCK3Q8IZD9 2030 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 RPL23P62829 140 aaKnown RBP7.03□□□□□ -1.28
APOB-201ENST00000233242 ZNF385AQ96PM9 386 aaKnown RBP7.03□□□□□ -1.28
APOB-201ENST00000233242 PILRAQ9UKJ1 303 aa7.03□□□□□ -1.28
APOB-201ENST00000233242 CD3EP07766 207 aa7.02□□□□□ -1.28
APOB-201ENST00000233242 CCL3P10147 92 aa7.02□□□□□ -1.28
APOB-201ENST00000233242 MEGF9Q9H1U4 602 aa7.02□□□□□ -1.28
APOB-201ENST00000233242 FAM157AC9JC47 383 aa7.02□□□□□ -1.29
APOB-201ENST00000233242 APOHP02749 345 aaPredicted RBP7.02□□□□□ -1.29
APOB-201ENST00000233242 PPBPP02775 128 aa7.02□□□□□ -1.29
APOB-201ENST00000233242 PEBP1P30086 187 aaKnown RBP7.02□□□□□ -1.29
APOB-201ENST00000233242 DOCK6Q96HP0 2047 aa7.02□□□□□ -1.29
APOB-201ENST00000233242 QSER1Q2KHR3 1735 aa7.02□□□□□ -1.29
APOB-201ENST00000233242 Q5PR19 223 aa7.02□□□□□ -1.29
APOB-201ENST00000233242 GFRALQ6UXV0 394 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms