RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 ZNF506Q5JVG8 444 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 AP5S1Q9NUS5 200 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 NPIPB7O75200 414 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 TMPRSS3P57727 454 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
HDAC5-201ENST00000225983 TMEM78Q5T7P6 136 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 ATRAIDQ6UW56 229 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 LINC01560Q8TB33 94 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 C16orf92Q96LL3 132 aa13.68□□□□□ -0.22
HDAC5-201ENST00000225983 TRBV23-1A0A0A0MS06 115 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 IGHV1-2P23083 117 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 CFHR1Q03591 330 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 PNKDQ8N490 385 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 A8MXK9 166 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 CDK2AP1O14519 115 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 PF4V1P10720 104 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 GCHFRP30047 84 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 LY6G6FQ5SQ64 297 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 TMEM186Q96B77 213 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 SSBP3Q9BWW4 388 aaPredicted RBP13.67□□□□□ -0.22
HDAC5-201ENST00000225983 AMY1AP04745 511 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 LINC00518Q8N0U6 118 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 FAM216BQ8N7L0 139 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 SLC25A33Q9BSK2 321 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 SRIP30626 198 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 PCSK4Q6UW60 755 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 SFRP2Q96HF1 295 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 GVINP1Q7Z2Y8 2422 aa13.67□□□□□ -0.22
HDAC5-201ENST00000225983 IL6RP08887 468 aaPredicted RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 GLRXP35754 106 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 PSMB2P49721 201 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 PAQR4Q8N4S7 273 aaPredicted RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 IGHV3-35A0A0C4DH35 117 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 SPATA45Q537H7 98 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 OR10S1Q8NGN2 331 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 NEU1Q99519 415 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 RNF126Q9BV68 326 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 MDC1Q14676 2089 aaKnown RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 SCN5AQ14524 2016 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 PQLC2LA1A4F0 135 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 CDX1P47902 265 aaPredicted RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 HERVK_113P61574 105 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 SRSF9Q13242 221 aaKnown RBP eCLIP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 BIVMQ86UB2 503 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 PLPPR1Q8TBJ4 325 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 LOC102724200A0A096LPH7 203 aaPredicted RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 OTX1P32242 354 aaPredicted RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 TIMM23BQ5SRD1 257 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 PLSCR2Q9NRY7 297 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 RTTNQ86VV8 2226 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 IFNL4K9M1U5 179 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 GCGP01275 180 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 ID1P41134 155 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 METTL26Q96S19 204 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 CLEC7AQ9BXN2 247 aa13.66□□□□□ -0.22
HDAC5-201ENST00000225983 CARHSP1Q9Y2V2 147 aaKnown RBP13.66□□□□□ -0.22
HDAC5-201ENST00000225983 IGHV2OR16-5A0A0B4J2B6 119 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 IGKV1D-13A0A0B4J2D9 117 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 IGKV1-13P0DP09 117 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 LHX2P50458 406 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 MFAP4P55083 255 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 DYNLRB2Q8TF09 96 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 WBP1Q96G27 269 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 GP6Q9HCN6 339 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 A0A0A6YYD4 124 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 BTF3P20290 206 aaKnown RBP13.65□□□□□ -0.22
HDAC5-201ENST00000225983 CKS2P33552 79 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 ZNF738Q8NE65 137 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 SRSF12Q8WXF0 261 aaKnown RBP13.65□□□□□ -0.22
HDAC5-201ENST00000225983 KLHDC3Q9BQ90 382 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 DICER1Q9UPY3 1922 aaKnown RBP13.65□□□□□ -0.22
HDAC5-201ENST00000225983 GFRA1P56159 465 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 CENPWQ5EE01 88 aa13.65□□□□□ -0.22
HDAC5-201ENST00000225983 RALYQ9UKM9 306 aaKnown RBP13.65□□□□□ -0.22
HDAC5-201ENST00000225983 TFF1P04155 84 aa13.65□□□□□ -0.23
HDAC5-201ENST00000225983 TNFSF10P50591 281 aa13.65□□□□□ -0.23
HDAC5-201ENST00000225983 C5orf52A6NGY3 159 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 ATXN7O15265 892 aaPredicted RBP13.64□□□□□ -0.23
HDAC5-201ENST00000225983 WDYHV1Q96HA8 205 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 ZFP30Q9Y2G7 519 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 DOCK6Q96HP0 2047 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 LOC102723996A0A087X1L8 192 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 EFNA2O43921 213 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 SNCGO76070 127 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 MAS1LP35410 378 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 HINT1P49773 126 aaPredicted RBP13.64□□□□□ -0.23
HDAC5-201ENST00000225983 LOC105371242A0A075B767 164 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 IGKV1D-8A0A087WSZ0 117 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 A6NDN8 102 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 ZNF883P0CG24 379 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 SRSF3P84103 164 aaKnown RBP13.64□□□□□ -0.23
HDAC5-201ENST00000225983 LBHQ53QV2 105 aaPredicted RBP13.64□□□□□ -0.23
HDAC5-201ENST00000225983 OR4A47Q6IF82 309 aa13.64□□□□□ -0.23
HDAC5-201ENST00000225983 PINLYPA6NC86 204 aa13.63□□□□□ -0.23
HDAC5-201ENST00000225983 IGFBP2P18065 325 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms