RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 HTR1DP28221 377 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 DYNLT3P51808 116 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 ZNF266Q14584 549 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 SPANXN5Q5MJ07 72 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 TMEM14EPQ6UXP3 125 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 VMO1Q7Z5L0 202 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 OR5C1Q8NGR4 320 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 MMP26Q9NRE1 261 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 DPM3Q9P2X0 92 aa13.59□□□□□ -0.23
TVP23C-201ENST00000225576 SAA1P0DJI8 122 aaPredicted RBP13.58□□□□□ -0.24
TVP23C-201ENST00000225576 CEACAM3P40198 252 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 LGALS7P47929 136 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.24
TVP23C-201ENST00000225576 RPS16P62249 146 aaKnown RBP13.58□□□□□ -0.24
TVP23C-201ENST00000225576 TPTE2P1Q5T6R2 138 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 ZNF787Q6DD87 383 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 TMEM217Q8N7C4 229 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 OR4A5Q8NH83 315 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 VSTM2AQ8TAG5 236 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 NRGNQ92686 78 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 ZDHHC16Q969W1 377 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 PERPQ96FX8 193 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 GINS3Q9BRX5 216 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 MS4A7Q9GZW8 240 aaPredicted RBP13.58□□□□□ -0.24
TVP23C-201ENST00000225576 FKBP11Q9NYL4 201 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 NUP50Q9UKX7 468 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 ZNF257Q9Y2Q1 563 aa13.58□□□□□ -0.24
TVP23C-201ENST00000225576 STRAPQ9Y3F4 350 aaKnown RBP13.58□□□□□ -0.24
TVP23C-201ENST00000225576 IGHV4-61A0A0C4DH41 118 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 DFFBO76075 338 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 KBTBD11O94819 623 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 METTL15P1P0C7V9 234 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 TMEM267Q0VDI3 215 aaPredicted RBP13.57□□□□□ -0.24
TVP23C-201ENST00000225576 CLINT1Q14677 625 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 FAM74A1Q5RGS3 127 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 LRRC20Q8TCA0 184 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 TMED6Q8WW62 240 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 CLCC1Q96S66 551 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 LRRK2Q5S007 2527 aa13.57□□□□□ -0.24
TVP23C-201ENST00000225576 IGHV4-30-2A0A087WSY4 118 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 FGF2P09038 288 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 COL8A1P27658 744 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 VDAC2P45880 294 aaPredicted RBP13.56□□□□□ -0.24
TVP23C-201ENST00000225576 DVL1P1P54792 670 aaPredicted RBP13.56□□□□□ -0.24
TVP23C-201ENST00000225576 HBG1P69891 147 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 HBG2P69892 147 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 KLRD1Q13241 179 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 MOB3BQ86TA1 216 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 PDZD9Q8IXQ8 264 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 PCNPQ8WW12 178 aaKnown RBP13.56□□□□□ -0.24
TVP23C-201ENST00000225576 RBMXL1Q96E39 390 aaKnown RBP13.56□□□□□ -0.24
TVP23C-201ENST00000225576 OR4C12Q96R67 309 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 ATP5SQ99766 215 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 HIPK2Q9H2X6 1198 aa13.56□□□□□ -0.24
TVP23C-201ENST00000225576 A0A1W2PPI3 338 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 FAM157AC9JC47 383 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 RNASEK-C17orf49H0YIS7 233 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 TOX4O94842 621 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 SCAF4O95104 1147 aaKnown RBP13.55□□□□□ -0.24
TVP23C-201ENST00000225576 SEC11BP0C7V7 166 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 HOXB4P17483 251 aaPredicted RBP13.55□□□□□ -0.24
TVP23C-201ENST00000225576 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
TVP23C-201ENST00000225576 RPP30P78346 268 aaKnown RBP13.55□□□□□ -0.24
TVP23C-201ENST00000225576 SPINK9Q5DT21 86 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 LDLRAD2Q5SZI1 272 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 MINOS1Q5TGZ0 78 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 HAPLN4Q86UW8 402 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 TMEM167AQ8TBQ9 72 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 RNF141Q8WVD5 230 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 TSNAXQ99598 290 aaKnown RBP13.55□□□□□ -0.24
TVP23C-201ENST00000225576 RNF5Q99942 180 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 MINOS1-NBL1R4GNA1 71 aa13.55□□□□□ -0.24
TVP23C-201ENST00000225576 IGHV3-72A0A0B4J1Y9 119 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 PMS2P5A8MQ11 134 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 OOSP1A8MZH6 123 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 FGF16O43320 207 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 FAM157CP0CG43 387 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 ARL16Q0P5N6 197 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 OR5B3Q8NH48 314 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 MED9Q9NWA0 146 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 SPP1P10451 314 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 RPL8P62917 257 aaKnown RBP13.54□□□□□ -0.24
TVP23C-201ENST00000225576 HABP2Q14520 560 aaPredicted RBP13.54□□□□□ -0.24
TVP23C-201ENST00000225576 TEX45Q8NA69 505 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 TBX15Q96SF7 602 aa13.54□□□□□ -0.24
TVP23C-201ENST00000225576 HEYLQ9NQ87 328 aaPredicted RBP13.54□□□□□ -0.24
TVP23C-201ENST00000225576 TEX50A0A1B0GTY4 177 aa13.53□□□□□ -0.24
TVP23C-201ENST00000225576 C15orf62A8K5M9 175 aa13.53□□□□□ -0.24
TVP23C-201ENST00000225576 FBXO24O75426 580 aa13.53□□□□□ -0.24
TVP23C-201ENST00000225576 SLC25A16P16260 332 aa13.53□□□□□ -0.24
TVP23C-201ENST00000225576 CD1BP29016 333 aa13.53□□□□□ -0.24
TVP23C-201ENST00000225576 HOXA1P49639 335 aaPredicted RBP13.53□□□□□ -0.24
TVP23C-201ENST00000225576 SULT1A2P50226 295 aa13.53□□□□□ -0.24
TVP23C-201ENST00000225576 UBE2E1P51965 193 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms