RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KBTBD11O94819 623 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 OR9G9P0C7N8 305 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 ERVK-16P61578 105 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 RELBQ01201 579 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 MMDQ15546 238 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 C5orf64Q2M2E5 130 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 VMA21Q3ZAQ7 101 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 AARDQ4LEZ3 155 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 SSX9Q7RTT3 188 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 H2BFWTQ7Z2G1 175 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 UXS1Q8NBZ7 420 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 OR5M8Q8NGP6 311 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 OR4A5Q8NH83 315 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 CHAC2Q8WUX2 184 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 SLC25A33Q9BSK2 321 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 MED28Q9H204 178 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 COA4Q9NYJ1 87 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
SEC61B-201ENST00000223641 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 A0A1B0GU03 582 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 CLDN34H7C241 214 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 PITX3O75364 302 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 IFNA21P01568 189 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 AMY1AP04745 511 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 LY6EQ16553 131 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 IZUMO4Q1ZYL8 232 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 PPP1R27Q86WC6 154 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 OR10C1Q96KK4 312 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 FBXL15Q9H469 300 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 KIAA1456Q9P272 454 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 METTL1Q9UBP6 276 aaKnown RBP11.17□□□□□ -0.62
SEC61B-201ENST00000223641 MOB4Q9Y3A3 225 aa11.17□□□□□ -0.62
SEC61B-201ENST00000223641 BTBD17A6NE02 478 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 HMX3A6NHT5 357 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 CCSO14618 274 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 CHST1O43916 411 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 CXCL3P19876 107 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 H2BFSP57053 126 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 SSBP2P81877 361 aaPredicted RBP11.16□□□□□ -0.62
SEC61B-201ENST00000223641 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
SEC61B-201ENST00000223641 IL15RAQ13261 267 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 FCN2Q15485 313 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
SEC61B-201ENST00000223641 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 TMEM219Q86XT9 240 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 FOXRED2Q8IWF2 684 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 ESM1Q9NQ30 184 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 TMEM14BQ9NUH8 114 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 MGAT4CQ9UBM8 478 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 TNCP24821 2201 aa11.16□□□□□ -0.62
SEC61B-201ENST00000223641 TET2Q6N021 2002 aaPredicted RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 C15orf61A6NNL5 157 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 NCBP2LA6PVI3 153 aaKnown RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 M0QZK8 103 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 FCN1O00602 326 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 GOSR2O14653 212 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 HLA-DRB1P01911 266 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 TRAPPC2P0DI81 140 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 TRAPPC2BP0DI82 140 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 BCAP31P51572 246 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 HILS1P60008 231 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 PJVKQ0ZLH3 352 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 SMCO1Q147U7 214 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 PRSS8Q16651 343 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 RNASE11Q8TAA1 199 aaKnown RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 C2orf50Q96LR7 162 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 SPIN2AQ99865 258 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 SPIN2BQ9BPZ2 258 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 CHIAQ9BZP6 476 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 ZNF430Q9H8G1 570 aaPredicted RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 CACNG5Q9UF02 275 aa11.15□□□□□ -0.62
SEC61B-201ENST00000223641 FOXA2Q9Y261 457 aaPredicted RBP11.15□□□□□ -0.62
SEC61B-201ENST00000223641 DNAJC9-AS1A6NH13 148 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 SNAPC5O75971 98 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 SIX6O95475 246 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 MAS1LP35410 378 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
SEC61B-201ENST00000223641 IAH1Q2TAA2 248 aaPredicted RBP11.14□□□□□ -0.63
SEC61B-201ENST00000223641 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
SEC61B-201ENST00000223641 ZNF562Q6V9R5 426 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 OR4D5Q8NGN0 318 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
SEC61B-201ENST00000223641 PRNDQ9UKY0 176 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 NSG2Q9Y328 171 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 PLXNB1O43157 2135 aa11.14□□□□□ -0.63
SEC61B-201ENST00000223641 hCG_2014768A0A024R1R8 64 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 FAM90A26D6RGX4 464 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 ID3Q02535 119 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 ZBTB8BQ8NAP8 495 aaPredicted RBP11.13□□□□□ -0.63
SEC61B-201ENST00000223641 OR52E5Q8NH55 327 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 OR4A16Q8NH70 328 aa11.13□□□□□ -0.63
SEC61B-201ENST00000223641 ASB13Q8WXK3 278 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms