RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TMEM140Q9NV12 185 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 CALYQ9NYX4 217 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
CNOT3-201ENST00000221232 A0A0U1RQK1 487 aa12.08□□□□□ -0.47
CNOT3-201ENST00000221232 C17orf112F2Z3M2 114 aa12.08□□□□□ -0.47
CNOT3-201ENST00000221232 NDUFB4O95168 129 aa12.08□□□□□ -0.47
CNOT3-201ENST00000221232 MBP02144 154 aa12.08□□□□□ -0.47
CNOT3-201ENST00000221232 GNB2P62879 340 aa12.08□□□□□ -0.47
CNOT3-201ENST00000221232 ACOT6Q3I5F7 207 aaPredicted RBP12.08□□□□□ -0.47
CNOT3-201ENST00000221232 PDLIM3Q53GG5 364 aaPredicted RBP12.08□□□□□ -0.47
CNOT3-201ENST00000221232 PARD6GQ9BYG4 376 aaPredicted RBP12.08□□□□□ -0.47
CNOT3-201ENST00000221232 HCFC1P51610 2035 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 CD82P27701 267 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 RND2P52198 227 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 CASP6P55212 293 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 CT45A1Q5HYN5 189 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 HIST3H2BBQ8N257 126 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 OR10A7Q8NGE5 316 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 CT45A3Q8NHU0 189 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 OR5B12Q96R08 314 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 MRPL37Q9BZE1 423 aaKnown RBP12.08□□□□□ -0.48
CNOT3-201ENST00000221232 IFI27L2Q9H2X8 130 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 PKDREJQ9NTG1 2253 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 YLPM1P49750 1951 aaKnown RBP12.08□□□□□ -0.48
CNOT3-201ENST00000221232 A0A1B0GV90 55 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 MMP23AO75900 390 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 Q8N7P7 452 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 FAM215AQ9Y5M1 114 aa12.08□□□□□ -0.48
CNOT3-201ENST00000221232 KALRNO60229 2985 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 FAM216BQ8N7L0 139 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 PPP1R35Q8TAP8 253 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 NEIL1Q96FI4 390 aaPredicted RBP12.07□□□□□ -0.48
CNOT3-201ENST00000221232 SEC14L6B5MCN3 397 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
CNOT3-201ENST00000221232 RELBQ01201 579 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 FAM90A1Q86YD7 464 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 TMEM170AQ8WVE7 144 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 RHOVQ96L33 236 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 WDR83OSQ9Y284 106 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 POLEQ07864 2286 aa12.07□□□□□ -0.48
CNOT3-201ENST00000221232 SPCS3P61009 180 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 GNB1P62873 340 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 CCL8P80075 99 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 MGST2Q99735 147 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 TMEM242Q9NWH2 141 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 JPT1Q9UK76 154 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 SAA2-SAA4A0A096LPE2 208 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 ZNF891A8MT65 544 aaPredicted RBP12.06□□□□□ -0.48
CNOT3-201ENST00000221232 YPEL1O60688 119 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 SAA2P0DJI9 122 aaPredicted RBP12.06□□□□□ -0.48
CNOT3-201ENST00000221232 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 C17orf58Q2M2W7 97 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 SPATA31B1PQ5VZV4 182 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 ZNF114Q8NC26 417 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 RND1Q92730 232 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 WFIKKN1Q96NZ8 548 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 YPEL2Q96QA6 119 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 PXMP4Q9Y6I8 212 aa12.06□□□□□ -0.48
CNOT3-201ENST00000221232 PPP5D1E7EU14 171 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 GFRA3O60609 400 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 ACTL6BO94805 426 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 NUBP1P53384 320 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 TNFAIP6P98066 277 aaPredicted RBP12.05□□□□□ -0.48
CNOT3-201ENST00000221232 MZT1Q08AG7 82 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 MOB3BQ86TA1 216 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 CTDSP1Q9GZU7 261 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 PRO1933Q9H354 126 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 TNCP24821 2201 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 ACACAQ13085 2346 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 TRBV24-1A0A075B6N3 115 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 FOXH1O75593 365 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 C1QTNF9P0C862 333 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 PFDN5Q99471 154 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 MANBALQ9NQG1 85 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 GFOD1Q9NXC2 390 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 FUT9Q9Y231 359 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 DSCAMO60469 2012 aa12.05□□□□□ -0.48
CNOT3-201ENST00000221232 MBD3L4A6NDZ8 208 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 MBD3L3A6NE82 208 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 MBD3L5A6NJ08 208 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 TMEM250H0YL14 139 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 MRPS11P82912 194 aaKnown RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 MLANAQ16655 118 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 VWC2Q2TAL6 325 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 MBD3L2Q8NHZ7 208 aaPredicted RBP12.04□□□□□ -0.48
CNOT3-201ENST00000221232 GCM1Q9NP62 436 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 NDUFB7P17568 137 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 GLRXP35754 106 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 TIMM23BQ5SRD1 257 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 TCTEX1D1Q8N7M0 179 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 THBS3P49746 956 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 TRAT1Q6PIZ9 186 aa12.04□□□□□ -0.48
CNOT3-201ENST00000221232 PACRGQ96M98 296 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms