RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 ZIC4Q8N9L1 334 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 H3BTX0 84 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 PSG7Q13046 419 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 SRSF12Q8WXF0 261 aaKnown RBP16.07■□□□□ 0.16
SMPD3-201ENST00000219334 MYO16Q9Y6X6 1858 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 IGLV3-12A0A075B6K2 115 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 NUDT3O95989 172 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 CBLN2Q8IUK8 224 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 SMIM8Q96KF7 97 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 NABP2Q9BQ15 211 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 RGPD3A6NKT7 1758 aaPredicted RBP16.07■□□□□ 0.16
SMPD3-201ENST00000219334 SCN10AQ9Y5Y9 1956 aa16.07■□□□□ 0.16
SMPD3-201ENST00000219334 C12orf77C9JDV5 145 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 FAM3BP58499 235 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-201ENST00000219334 ADIPOQQ15848 244 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-201ENST00000219334 ITLN2Q8WWU7 325 aaPredicted RBP16.06■□□□□ 0.16
SMPD3-201ENST00000219334 SMIM12Q96EX1 92 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 GATAD1Q8WUU5 269 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 MAP1LC3AQ9H492 121 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 TMEM262E9PQX1 116 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 METRNQ9UJH8 293 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 CD74P04233 296 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 DOCK3Q8IZD9 2030 aa16.06■□□□□ 0.16
SMPD3-201ENST00000219334 IGKV3OR2-268A0A0C4DH90 116 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 KBTBD11-OT1A0A1B0GTJ5 212 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 MOSP00540 346 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 NMUP48645 174 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 ZFP36L1Q07352 338 aaKnown RBP16.05■□□□□ 0.16
SMPD3-201ENST00000219334 CLDND2Q8NHS1 167 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 CEACAM4O75871 244 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 CD59P13987 128 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 CD200R1LQ6Q8B3 271 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 FAM90A1Q86YD7 464 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 PGLYRP4Q96LB8 373 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 LOC102723996A0A087X1L8 192 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 A0A1W2PRX2 142 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 ASPHD2Q6ICH7 369 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 RAB37Q96AX2 223 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.05■□□□□ 0.16
SMPD3-201ENST00000219334 ARL14EPLP0DKL9 152 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 SPSB4Q96A44 273 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 TGFBR3LH3BV60 316 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 RPS11P62280 158 aaKnown RBP eCLIP16.05■□□□□ 0.16
SMPD3-201ENST00000219334 C1QTNF5Q9BXJ0 243 aa16.05■□□□□ 0.16
SMPD3-201ENST00000219334 CACNA1IQ9P0X4 2223 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 SAPCD1Q5SSQ6 148 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 PET117Q6UWS5 81 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 ARPC1AQ92747 370 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 FOXI3A8MTJ6 420 aaPredicted RBP16.04■□□□□ 0.16
SMPD3-201ENST00000219334 IGHV3-23P01764 117 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 C5orf66Q9H5L9 145 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 CCDC88CQ9P219 2028 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 IGHV3-49A0A0A0MS15 119 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 GOLT1AQ6ZVE7 132 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 C21orf62Q9NYP8 219 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 LINC00312Q9Y6C7 94 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 NPIPB9F8W1W9 429 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 LHX2P50458 406 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 SMUG1Q53HV7 270 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 KIR2DL4Q99706 377 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 ATG101Q9BSB4 218 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 PEMTQ9UBM1 199 aa16.04■□□□□ 0.16
SMPD3-201ENST00000219334 ZMAT5Q9UDW3 170 aaKnown RBP16.04■□□□□ 0.16
SMPD3-201ENST00000219334 CA2P00918 260 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 HSPB1P04792 205 aaKnown RBP16.03■□□□□ 0.16
SMPD3-201ENST00000219334 RPL24P83731 157 aaKnown RBP16.03■□□□□ 0.16
SMPD3-201ENST00000219334 ABCA7Q8IZY2 2146 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 HLA-DQA1P01909 254 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 IQCF6A8MYZ5 107 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 C1QL1O75973 258 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 TCF24Q7RTU0 167 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 H3BVH4 76 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 COX6CP09669 75 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 SPTBP11277 2137 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 CRYBB3P26998 211 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 CD69Q07108 199 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 PRSS22Q9GZN4 317 aa16.03■□□□□ 0.16
SMPD3-201ENST00000219334 NPDC1Q9NQX5 325 aaPredicted RBP16.02■□□□□ 0.16
SMPD3-201ENST00000219334 NPFFO15130 113 aa16.02■□□□□ 0.16
SMPD3-201ENST00000219334 TMEM187Q14656 261 aa16.02■□□□□ 0.16
SMPD3-201ENST00000219334 REPIN1Q9BWE0 567 aaKnown RBP16.02■□□□□ 0.16
SMPD3-201ENST00000219334 ELF5Q9UKW6 265 aaPredicted RBP16.02■□□□□ 0.16
SMPD3-201ENST00000219334 C9JCJ5 164 aa16.02■□□□□ 0.16
SMPD3-201ENST00000219334 PAPPA-AS1Q5QFB9 102 aa16.02■□□□□ 0.16
SMPD3-201ENST00000219334 LINC00305Q7Z4B0 112 aa16.02■□□□□ 0.16
SMPD3-201ENST00000219334 OR13A1Q8NGR1 328 aa16.02■□□□□ 0.16
SMPD3-201ENST00000219334 M0QZK8 103 aa16.02■□□□□ 0.15
SMPD3-201ENST00000219334 AMY1AP04745 511 aa16.02■□□□□ 0.15
SMPD3-201ENST00000219334 SIGIRRQ6IA17 410 aa16.02■□□□□ 0.15
SMPD3-201ENST00000219334 THBDP07204 575 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 GPR183P32249 361 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 CIRBPQ14011 172 aaKnown RBP16.01■□□□□ 0.15
SMPD3-201ENST00000219334 CYP2G1PQ6ZSU1 146 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 CKAP5Q14008 2032 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 CD300CQ08708 224 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 GEMIN7Q9H840 131 aaKnown RBP16.01■□□□□ 0.15
SMPD3-201ENST00000219334 TMEM238LA0A1B0GVL6 79 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 A6NJY4 79 aa16.01■□□□□ 0.15
SMPD3-201ENST00000219334 VN1R17PQ8TDU5 208 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms