RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 FAM53AQ6NSI3 398 aaPredicted RBP8.09□□□□□ -1.11
TUBB1-201ENST00000217133 Q8IYB0 196 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 IFI44Q8TCB0 444 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 TMEM45BQ96B21 275 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 C15orf62A8K5M9 175 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 ZNF253O75346 499 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 NTF3P20783 257 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 GABRA2P47869 451 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 CEBPDP49716 269 aaPredicted RBP8.09□□□□□ -1.11
TUBB1-201ENST00000217133 VWC2Q2TAL6 325 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 PRAMEF5Q5TYX0 476 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 PRAMEF6Q5VXH4 476 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 VASH2Q86V25 355 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 OR2Y1Q8NGV0 311 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 GNB4Q9HAV0 340 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 NRN1Q9NPD7 142 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 DEPPQ9NTK1 212 aa8.09□□□□□ -1.11
TUBB1-201ENST00000217133 PCNX2A6NKB5 2137 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 IGHV3-43A0A0B4J1X8 118 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 GPX1P07203 203 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 IGHV3-43DP0DP04 118 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 SLC35B1P78383 322 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 C1orf174Q8IYL3 243 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 SCCPDHQ8NBX0 429 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 OR4A16Q8NH70 328 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 DEFB108AA8MXU0 73 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 C12orf77C9JDV5 145 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 MPDU1O75352 247 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 KLF7O75840 302 aaPredicted RBP8.08□□□□□ -1.12
TUBB1-201ENST00000217133 HBZP02008 142 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 STAG3L2P0CL84 134 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 STAG3L3P0CL85 134 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 ESDP10768 282 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 TCL1AP56279 114 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 LINC00205P59089 165 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 Q0VG73 95 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 LTC4SQ16873 150 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 KLHDC1Q8N7A1 406 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 RFESDQ8TAC1 157 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 MRGPRDQ8TDS7 321 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 CHODLQ9H9P2 273 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 MBNL3Q9NUK0 354 aaKnown RBP8.08□□□□□ -1.12
TUBB1-201ENST00000217133 LAMTOR2Q9Y2Q5 125 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 FRMD6-AS1P0C7T7 363 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 CCL4P13236 92 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 IL11RAQ14626 422 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 PEAR1Q5VY43 1037 aaPredicted RBP8.08□□□□□ -1.12
TUBB1-201ENST00000217133 BORCS7Q96B45 105 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 LINC00470Q9BZP3 86 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 FAM234AQ9H0X4 552 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 PSG11Q9UQ72 335 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 ZFHX4Q86UP3 3567 aa8.08□□□□□ -1.12
TUBB1-201ENST00000217133 SPTBN4Q9H254 2564 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 HAND1O96004 215 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 MT-CO3P00414 261 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 OPRK1P41145 380 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 CYB561P49447 251 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 LGALS4P56470 323 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 AESQ08117 197 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 PLA2G2CQ5R387 149 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 STPG4Q8N801 248 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 ZNF703Q9H7S9 590 aaPredicted RBP8.07□□□□□ -1.12
TUBB1-201ENST00000217133 SERTAD4Q9NUC0 356 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 SLC45A2Q9UMX9 530 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 YTHDF2Q9Y5A9 579 aaKnown RBP8.07□□□□□ -1.12
TUBB1-201ENST00000217133 P0C879 139 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 GCHFRP30047 84 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 GNG4P50150 75 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 TMEM249Q2WGJ8 235 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 WDR73Q6P4I2 378 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 TCTEX1D1Q8N7M0 179 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 ST6GALNAC3Q8NDV1 305 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 BOKQ9UMX3 212 aaPredicted RBP8.07□□□□□ -1.12
TUBB1-201ENST00000217133 CEP295Q9C0D2 2601 aa8.07□□□□□ -1.12
TUBB1-201ENST00000217133 TRBV9A0A0B4J1U6 114 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 HINT1P49773 126 aaPredicted RBP8.06□□□□□ -1.12
TUBB1-201ENST00000217133 LEMD1Q68G75 181 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 TREML4Q6UXN2 200 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 ATOH7Q8N100 152 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 PLPPR2Q96GM1 343 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 EAF1Q96JC9 268 aaPredicted RBP8.06□□□□□ -1.12
TUBB1-201ENST00000217133 MS4A5Q9H3V2 200 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 GCM1Q9NP62 436 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 RNF114Q9Y508 228 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 BOD1L1Q8NFC6 3051 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 DMXL2Q8TDJ6 3036 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 OOEPA6NGQ2 149 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 K7EN84 100 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 RRHO14718 337 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 FCGR3BO75015 233 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 MT-ND6P03923 174 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 COMPP49747 757 aaPredicted RBP8.06□□□□□ -1.12
TUBB1-201ENST00000217133 RHOBP62745 196 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 RAB31Q13636 194 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 MRPL54Q6P161 138 aaKnown RBP8.06□□□□□ -1.12
TUBB1-201ENST00000217133 GCNT2Q8N0V5 402 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 OR4P4Q8NGL7 312 aa8.06□□□□□ -1.12
TUBB1-201ENST00000217133 C5orf30Q96GV9 206 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms