RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TMEM256Q8N2U0 113 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 TMEM178AQ8NBL3 297 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 FAM103A1Q9BTL3 118 aaKnown RBP12.55□□□□□ -0.4
EFNB1-201ENST00000204961 LRFN3Q9BTN0 628 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 PKIBQ9C010 78 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 NAT8Q9UHE5 227 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF292O60281 2723 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 CCL8P80075 99 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 Q8NFD4 153 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 OR2V2Q96R30 315 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 TMEM147Q9BVK8 224 aa12.55□□□□□ -0.4
EFNB1-201ENST00000204961 TRIP6Q15654 476 aaKnown RBP12.54□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF705AQ6ZN79 300 aaPredicted RBP12.54□□□□□ -0.4
EFNB1-201ENST00000204961 C11orf53Q8IXP5 236 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 SIRT7Q9NRC8 400 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 PITPNC1Q9UKF7 332 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 SCO2A0A1W2PP80 73 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 PROP1O75360 226 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 OR1P1Q8NH06 330 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 A0A087WWC5 75 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 OOEPA6NGQ2 149 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 PLAUP00749 431 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 CD1BP29016 333 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 TNFSF10P50591 281 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
EFNB1-201ENST00000204961 OR8G5Q8NG78 346 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 LSM10Q969L4 123 aaKnown RBP12.54□□□□□ -0.4
EFNB1-201ENST00000204961 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
EFNB1-201ENST00000204961 A8MWP6 167 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.53□□□□□ -0.4
EFNB1-201ENST00000204961 MAS1LP35410 378 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 KIR2DL2P43627 348 aaPredicted RBP12.53□□□□□ -0.4
EFNB1-201ENST00000204961 PCP4P48539 62 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 FXYD3Q14802 87 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 ZNF718Q3SXZ3 478 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 SGMS2Q8NHU3 365 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 CCL13Q99616 98 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 MS4A5Q9H3V2 200 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 GP6Q9HCN6 339 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 SERTAD4Q9NUC0 356 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 CTXND1A0A1B0GTU2 59 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 DUXBA0A1W2PPF3 345 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 CYC1P08574 325 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 COX5BP10606 129 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 OR2T10Q8NGZ9 312 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 ITLN1Q8WWA0 313 aa12.53□□□□□ -0.4
EFNB1-201ENST00000204961 TOX4O94842 621 aa12.52□□□□□ -0.4
EFNB1-201ENST00000204961 CBLN1P23435 193 aa12.52□□□□□ -0.4
EFNB1-201ENST00000204961 SPCS3P61009 180 aa12.52□□□□□ -0.4
EFNB1-201ENST00000204961 SERF2P84101 59 aa12.52□□□□□ -0.4
EFNB1-201ENST00000204961 TMEM14EPQ6UXP3 125 aa12.52□□□□□ -0.4
EFNB1-201ENST00000204961 OR4P4Q8NGL7 312 aa12.52□□□□□ -0.4
EFNB1-201ENST00000204961 NEIL1Q96FI4 390 aaPredicted RBP12.52□□□□□ -0.4
EFNB1-201ENST00000204961 TIMM8BQ9Y5J9 83 aaPredicted RBP12.52□□□□□ -0.4
EFNB1-201ENST00000204961 NUPR1O60356 82 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 CD82P27701 267 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 ERVK11-1P61568 191 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 GNB1P62873 340 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 JOSD1Q15040 202 aaPredicted RBP12.52□□□□□ -0.41
EFNB1-201ENST00000204961 TMEM183AQ8IXX5 376 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 SEPSECSQ9HD40 501 aaKnown RBP12.52□□□□□ -0.41
EFNB1-201ENST00000204961 KBTBD11O94819 623 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 CEACAM1P13688 526 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 SMIM21Q3B7S5 101 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 GMPPAQ96IJ6 420 aaPredicted RBP12.52□□□□□ -0.41
EFNB1-201ENST00000204961 S1PR3Q99500 378 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 HSD17B10Q99714 261 aaKnown RBP12.52□□□□□ -0.41
EFNB1-201ENST00000204961 ZPBPQ9BS86 351 aa12.52□□□□□ -0.41
EFNB1-201ENST00000204961 H3BTX0 84 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 BTF3P20290 206 aaKnown RBP12.51□□□□□ -0.41
EFNB1-201ENST00000204961 ERVK-16P61578 105 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 ZNF146Q15072 292 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 Q6ZS49 121 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 C22orf34Q6ZV56 151 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 SPRY4Q9C004 299 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 MMP23AO75900 390 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 PAX5Q02548 391 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 MBD3L1Q8WWY6 194 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 OR6C3Q9NZP0 311 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 WIPI2Q9Y4P8 454 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 TRAPPC1Q9Y5R8 145 aa12.51□□□□□ -0.41
EFNB1-201ENST00000204961 IGHV3-72A0A0B4J1Y9 119 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 C15orf62A8K5M9 175 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 C21orf140B9A014 251 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 M0R296 226 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 MGST1P10620 155 aaKnown RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 Q8TCH9 128 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 NDUFAF3Q9BU61 184 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 CXXC4Q9H2H0 198 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 RBFOX2O43251 390 aaKnown RBP eCLIP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 OR7C2O60412 319 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 Q8IYB0 196 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 WDR31Q8NA23 367 aa12.5□□□□□ -0.41
EFNB1-201ENST00000204961 SNIP1Q8TAD8 396 aaKnown RBP12.5□□□□□ -0.41
EFNB1-201ENST00000204961 IGFBPL1Q8WX77 278 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms