RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PPIAL4FP0DN26 164 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 ERGP11308 486 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 ANOS1P23352 680 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF83P51522 516 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PRSS8Q16651 343 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 FOXB2Q5VYV0 432 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PCSK4Q6UW60 755 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 BCDIN3DQ7Z5W3 292 aaKnown RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 DEFB127Q9H1M4 99 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 TNFRSF19Q9NS68 423 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 YBX2Q9Y2T7 364 aaKnown RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PPIAL4AQ9Y536 164 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 F8P00451 2351 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 TRAV34A0A0B4J273 112 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 IGHV3-9P01782 118 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 FAAP20Q6NZ36 180 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 LDLRAD3Q86YD5 345 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PUSL1Q8N0Z8 303 aaKnown RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 STARD6P59095 220 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 SP6Q3SY56 376 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 ARPC1AQ92747 370 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 SSBP4Q9BWG4 385 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 NKX2-8O15522 239 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 KLRB1Q12918 225 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 DMRTA1Q5VZB9 504 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 HDHD3Q9BSH5 251 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PRRT4C9JH25 899 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PAGE4O60829 102 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 INAFM2P0DMQ5 153 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 NPPCP23582 126 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 MGAT2Q10469 447 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 FHL5Q5TD97 284 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 LHX8Q68G74 356 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 OR9G1Q8NH87 305 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 CTGFP29279 349 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 LINC01545Q5VT33 79 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 CYP2G1PQ6ZSU1 146 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 PRNTQ86SH4 94 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 NRSN2Q9GZP1 204 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 C6orf106Q9H6K1 298 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-201ENST00000011700 C2CD3Q4AC94 2353 aa5.25□□□□□ -1.57
VPS13D-201ENST00000011700 FAM27D1Q5T7N8 215 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 EDA2RQ9HAV5 297 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ANKRD10Q9NXR5 420 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TRBV5-3A0A0A0MS03 114 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TRBV5-5A0A0J9YX44 114 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 B4GALT3O60512 393 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TSPAN2O60636 221 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 MGPP08493 103 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 NMBP08949 121 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 IFI27P40305 119 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 RAE1P78406 368 aaKnown RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ZIC1Q15915 447 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 FAM181BA6NEQ2 426 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 FCGR3AP08637 254 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 SUMO2P61956 95 aaKnown RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TNFRSF18Q9Y5U5 241 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TRAV39A0A0B4J263 110 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TMEM8BA6NDV4 472 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 NPFFO15130 113 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 C8orf82Q6P1X6 216 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 SLC25A48Q6ZT89 311 aaKnown RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF775Q96BV0 537 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 PEMTQ9UBM1 199 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ARL14EPLP0DKL9 152 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 MYOGP15173 224 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 FGF8P55075 233 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 DLK2Q6UY11 383 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 FAM214BQ7L5A3 538 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 OR4D11Q8NGI4 311 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 CLEC7AQ9BXN2 247 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 CEACAM4O75871 244 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 VEGFBP49765 207 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 DEFB109BQ30KR1 87 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF750Q32MQ0 723 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 CXorf66Q5JRM2 361 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 DEFB108BQ8NET1 73 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 RNF167Q9H6Y7 350 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 SPCS1Q9Y6A9 102 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 GPX1P07203 203 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF721Q8TF20 911 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 RGP1Q92546 391 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 PPP1R3EQ9H7J1 279 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 CHTOPQ9Y3Y2 248 aaKnown RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 C5orf67F2Z3F1 127 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 GPR183P32249 361 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ARF6P62330 175 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 TIMM23BQ5SRD1 257 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 ADAD2Q8NCV1 583 aaKnown RBP5.24□□□□□ -1.57
VPS13D-201ENST00000011700 PRDM13Q9H4Q3 707 aa5.24□□□□□ -1.57
VPS13D-201ENST00000011700 LINC00614P0C842 121 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 GLI4P10075 376 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SPNP16150 400 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 ERVK11-1P61568 191 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 OR52E5Q8NH55 327 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 TCF21O43680 179 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 ATP5G2Q06055 141 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 SRSF1Q07955 248 aaKnown RBP eCLIP5.23□□□□□ -1.573e-6■■■■□ 22.5
VPS13D-201ENST00000011700 ZFAND6Q6FIF0 208 aa5.23□□□□□ -1.57
VPS13D-201ENST00000011700 ZNF793Q6ZN11 406 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms