RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 AtraidQ6PGD0 223 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr222Q7TS30 318 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr181Q8VGQ7 317 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Dnajb11Q99KV1 358 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Wdr4Q9EP82 413 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Slc25a15Q9WVD5 301 aa13.47□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gfra3O35118 397 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 A3galt2Q3V1N9 370 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 Tfap2eQ6VUP9 442 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 Galnt11Q921L8 608 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 Vmn1r171Q9EPS6 316 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 Olfr945Q9EQB5 319 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 Nat8Q9JIY7 227 aa13.46□□□□□ -0.25
Trim39-203ENSMUST00000113706 Gm7233E9PZI8 198 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm9732F6QVC4 198 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm8104K7N744 198 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Vmn1r80L7N1Z3 308 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Wdr1O88342 606 aaKnown RBP13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tnfrsf17O88472 185 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tff3Q62395 81 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Sys1Q78S06 156 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Q80W69 301 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 GhsrQ99P50 364 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rep15Q9D7T1 230 aa13.46□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ankdd1aA0A1L1ST07 508 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm20815J3KMI0 227 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm20914J3QME2 227 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Fpr2O88536 351 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ceacam10Q61400 265 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm21292Q78EE2 227 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rnd1Q8BLR7 232 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 DohhQ99LN9 302 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rcl1Q9JJT0 373 aaKnown RBP13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Lbhd2G3UW55 114 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr224M9MMJ7 314 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Efnb2P52800 336 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tbr1Q64336 681 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Cstl1Q80Y72 140 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 MpiQ924M7 423 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 CutcQ9D8X1 272 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 TpbgQ9Z0L0 426 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Spg11Q3UHA3 2430 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 A630073D07RikE9PWS6 100 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr554E9Q546 317 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr251E9Q891 316 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm6882J3KMT3 313 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr635K7N6B1 321 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Bet1lO35153 111 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Mtatp6P00848 226 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Fndc4Q3TR08 231 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm10662Q3UT86 313 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Cacfd1Q8BG21 171 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 JkampQ8BI36 311 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Znhit1Q8R331 154 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr133Q8VG94 312 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Nmnat3Q99JR6 245 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Rab32Q9CZE3 223 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gal3st1Q9JHE4 423 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 Pex14Q9R0A0 376 aa13.45□□□□□ -0.26
Trim39-203ENSMUST00000113706 CrebbpP45481 2441 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tmem200bD3Z0P8 284 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr432E9Q8M2 312 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Bcl2P10417 236 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gabra6P16305 453 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Tubg1P83887 451 aaKnown RBP13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 4933415F23RikQ14BX6 153 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr94Q6UAH0 386 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Scrt2Q8BTH6 311 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Vrk3Q8K3G5 453 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1279Q8VF38 313 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1280Q8VGG8 305 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Mettl21AQ9CQL0 218 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Mrps24Q9CQV5 167 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Fam96bQ9D187 163 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Prss21Q9JHJ7 324 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Syt7Q9R0N7 403 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Eif3gQ9Z1D1 320 aaKnown RBP13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Mbd2Q9Z2E1 414 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 P01798 113 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 P18532 116 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 S100a1P56565 94 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm11232Q5SPI8 295 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr1173Q7TR24 312 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 PaxxQ8K0Y7 205 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 PurgQ8R4E6 350 aaKnown RBP13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gtf3aQ8VHT7 364 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 P2ry6Q9ERK9 328 aa13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 NacaP70670 2187 aaKnown RBP13.44□□□□□ -0.26
Trim39-203ENSMUST00000113706 Gm14124A2AU83 715 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 HbzP06467 142 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 CtsbP10605 339 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Slc25a4P48962 298 aaKnown RBP13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Lsm5P62322 91 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 SelenohQ3UQA7 116 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Q3UZV7 1028 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Olfr195Q8VGQ6 308 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Poldip2Q91VA6 368 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ppp1r1aQ9ERT9 171 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Ankrd66J3QNN4 192 aa13.43□□□□□ -0.26
Trim39-203ENSMUST00000113706 Cxcl1P12850 96 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms