RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm6460F6YJZ8 199 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rarres1F6ZIS7 283 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm10338K7N692 204 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Mep1aP28825 747 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 PpicP30412 212 aaKnown RBP7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 TspoP50637 169 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rpusd3Q14AI6 344 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Psg26Q4KL65 475 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 TrmoQ562D6 431 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Kat7Q5SVQ0 613 aaKnown RBP7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Zfp30Q60585 533 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Zic3Q62521 466 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Scml4Q80VG1 408 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Taf15Q8BQ46 557 aaKnown RBP7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 LaynQ8C351 381 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Nhlrc3Q8CCH2 347 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r59Q8R2B9 310 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Q8VE95 218 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1411Q8VFC4 323 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr770Q8VGC2 311 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Teddm3Q9CQH1 294 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Atp5sQ9CRA7 200 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lypd8Q9D7S0 255 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 SmpxQ9DC77 85 aa7.32□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm45844A0A1B0GRQ2 137 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 A0A1Y7VLU2 103 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm17657E9PWY5 170 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lipo5F6QKH6 233 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 P01783 136 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 CfdP03953 259 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Bdkrb2P32299 392 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rbp2Q08652 134 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Reg2Q08731 173 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r15Q14C10 299 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr259Q7TS20 312 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 TncQ80YX1 2110 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Sdhaf2Q8C6I2 164 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Timm21Q8CCM6 249 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 CrhQ8CIT0 187 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Mic13Q8R404 119 aaKnown RBP7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr822Q8VFU1 312 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Flywch2Q9CQE9 139 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Fam219aQ9D772 157 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gmeb1Q9JL60 562 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 DspE9Q557 2883 aaKnown RBP7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Col6a4A2AX52 2309 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm10112D3YWP5 117 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm14548E9Q1Z6 680 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm11009F7CWA7 138 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 RelP15307 587 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cox6a1P43024 111 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ang4Q3TMQ6 144 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm813Q3UWK9 176 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Prdx2Q61171 198 aaKnown RBP7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr487Q7TRU9 314 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Dtd1Q9DD18 209 aaKnown RBP7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 EdarQ9R187 448 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 SpdefQ9WTP3 325 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr122W4VSP0 330 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Trav12-1A0N8R1 115 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr102B2RT33 308 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr739E9Q1P0 309 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Zfp961E9Q4R5 444 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1348F6VB59 318 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm8220F6YKI2 213 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Slc17a3G3UWD9 498 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 P01658 132 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cyb5aP56395 134 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 PnkdQ69ZP3 385 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Sec22aQ8BH47 307 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ahsa1Q8BK64 338 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Fhl4Q8CDC8 279 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Osbpl11Q8CI95 751 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r235Q8R297 328 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr720Q8VF37 316 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1420Q8VF55 309 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Odf4Q8VI88 290 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 H1fooQ8VIK3 304 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 4931428L18RikQ9D4S9 127 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Abhd5Q9DBL9 351 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Ackr1Q9QUI6 334 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Rnf7Q9WTZ1 113 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 AireQ9Z0E3 552 aa7.31□□□□□ -1.24
Trim39-201ENSMUST00000042717 Zfyve26Q5DU37 2529 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm21294A0A087WS79 222 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Lnp1A0A1B0GSK3 178 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1039A2ARY0 319 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Scgb1b30A2BH64 92 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Aldh3b2E9Q3E1 479 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Aldh3b3J3QMK6 479 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Tamm41Q3TUH1 337 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Cln6Q3U466 308 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Tmem184aQ3UFJ6 425 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Gm10192Q3V0S1 108 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Psg17Q62056 475 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1357Q7TQU7 313 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1283Q7TQY4 305 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Olfr1000Q7TR99 314 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Znf436Q8BPP0 452 aa7.3□□□□□ -1.24
Trim39-201ENSMUST00000042717 Vmn1r37Q8R2E4 302 aa7.3□□□□□ -1.24
Retrieved 100 of 22,080 RNA–protein pairs in 36.3 ms