RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RRNAD1Q96FB5 475 aaKnown RBP14.01□□□□□ -0.17
PHGDH-230ENST00000641927 ZNF48Q96MX3 618 aaPredicted RBP14.01□□□□□ -0.17
PHGDH-230ENST00000641927 MED28Q9H204 178 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 HIVEP2P31629 2446 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 A0A0B4J2A0 478 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 PIGBOS1A0A0B4J2F0 54 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 FAM90A9PA6NNJ1 464 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 ADAP1O75689 374 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 DYNLT3P51808 116 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 FBLN7Q53RD9 439 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 LRTM2Q8N967 370 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 RHOVQ96L33 236 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 TNFRSF19Q9NS68 423 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 SHPKQ9UHJ6 478 aa14.01□□□□□ -0.17
PHGDH-230ENST00000641927 ZFHX3Q15911 3703 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 SRRM4A7MD48 611 aaKnown RBP14□□□□□ -0.17
PHGDH-230ENST00000641927 FAM25EA8MYX2 175 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 GOSR2O14653 212 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 IFNA21P01568 189 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 CNTFRP26992 372 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 MMDQ15546 238 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 LY6EQ16553 131 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 RBMS3Q6XE24 437 aaKnown RBP14□□□□□ -0.17
PHGDH-230ENST00000641927 H2BFWTQ7Z2G1 175 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 THNSL2Q86YJ6 484 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 SIGLECL1Q8N7X8 197 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 TSNAXQ99598 290 aaKnown RBP14□□□□□ -0.17
PHGDH-230ENST00000641927 AIFM2Q9BRQ8 373 aa14□□□□□ -0.17
PHGDH-230ENST00000641927 NAV3Q8IVL0 2385 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 BTBD17A6NE02 478 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 NCBP2LA6PVI3 153 aaKnown RBP13.99□□□□□ -0.17
PHGDH-230ENST00000641927 CCSO14618 274 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 IGKV1-5P01602 117 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 IGHV4-59P01825 116 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 VDAC1P21796 283 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 LGALS7P47929 136 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 AANATQ16613 207 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 TMEM219Q86XT9 240 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 PIFOQ8TCI5 191 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 SEC22AQ96IW7 307 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 ANK3Q12955 4377 aaKnown RBP13.99□□□□□ -0.17
PHGDH-230ENST00000641927 MXRA5Q9NR99 2828 aa13.99□□□□□ -0.17
PHGDH-230ENST00000641927 C13orf42A0A1B0GVH6 325 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 SLC25A17O43808 307 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 SAA1P0DJI8 122 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-230ENST00000641927 IER3P46695 156 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 F2RL1P55085 397 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 RRAS2P62070 204 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-230ENST00000641927 EBI3Q14213 229 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 IZUMO4Q1ZYL8 232 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 VMA21Q3ZAQ7 101 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 GGNBP1Q5YKI7 109 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 OR4A47Q6IF82 309 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 Q6YL49 198 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 RNF5Q99942 180 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 TMEM140Q9NV12 185 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 KIAA1456Q9P272 454 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 MGAT4CQ9UBM8 478 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 TMED3Q9Y3Q3 217 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 DUXBA0A1W2PPF3 345 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 DBX1A6NMT0 343 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 HOXA3O43365 443 aaPredicted RBP13.98□□□□□ -0.17
PHGDH-230ENST00000641927 F8P00451 2351 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 PLGLAQ15195 96 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 C2orf68Q2NKX9 166 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 SSMEM1Q8WWF3 244 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 TCF19Q9Y242 345 aa13.98□□□□□ -0.17
PHGDH-230ENST00000641927 A0A0G2JRQ6 117 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 C5orf51A6NDU8 294 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 NBR2O15453 112 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 RBMXL2O75526 392 aaKnown RBP13.97□□□□□ -0.17
PHGDH-230ENST00000641927 IGLV2-23P01705 113 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 PSG5Q15238 335 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 FCN2Q15485 313 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 Q8N6K4 173 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 CHAC2Q8WUX2 184 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
PHGDH-230ENST00000641927 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
PHGDH-230ENST00000641927 PITPNC1Q9UKF7 332 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 MMP24Q9Y5R2 645 aa13.97□□□□□ -0.17
PHGDH-230ENST00000641927 MPTX1A8MV57 137 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 OR2A4O95047 310 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 SIX6O95475 246 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 UBE2KP61086 200 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 THOC7Q6I9Y2 204 aaKnown RBP13.96□□□□□ -0.17
PHGDH-230ENST00000641927 OR5R1Q8NH85 324 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 VSTM2AQ8TAG5 236 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 GPR146Q96CH1 333 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 OR2A7Q96R45 310 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 SLC25A33Q9BSK2 321 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 FBXL15Q9H469 300 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 PRDM13Q9H4Q3 707 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 C1RLQ9NZP8 487 aa13.96□□□□□ -0.17
PHGDH-230ENST00000641927 RRHO14718 337 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 POU2AF1Q16633 256 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 NMSQ5H8A3 153 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 GSG1LQ6UXU4 331 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 FAM219AQ8IW50 185 aa13.95□□□□□ -0.18
PHGDH-230ENST00000641927 RBM14Q96PK6 669 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms