RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 RNF150Q9ULK6 438 aa8.41□□□□□ -1.06
PHGDH-224ENST00000641711 ZNF469Q96JG9 3925 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 UMAD1C9J7I0 102 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 J3QLI3 93 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 RAB29O14966 203 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 SMAD7O15105 426 aaKnown RBP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 RBFOX2O43251 390 aaKnown RBP eCLIP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 SCO1O75880 301 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 DFFBO76075 338 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 DYNLT3P51808 116 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 ARHGDIBP52566 201 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 GNB2P62879 340 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 KRTAP1-1Q07627 177 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 C17orf58Q2M2W7 97 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 MIDNQ504T8 468 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 LRRC10Q5BKY1 277 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 FAM201AQ5SY85 155 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 WDR25Q64LD2 544 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 FAM53AQ6NSI3 398 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 Q6ZRG5 221 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 STX12Q86Y82 276 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 ZNRF1Q8ND25 227 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 DEFB108BQ8NET1 73 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 OR5C1Q8NGR4 320 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 RFESDQ8TAC1 157 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 SUN5Q8TC36 379 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 GNPNAT1Q96EK6 184 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 GAFA1Q96PS6 74 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 ATP5SQ99766 215 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 HIPK2Q9H2X6 1198 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 HRH4Q9H3N8 390 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 CALYQ9NYX4 217 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 HSPB7Q9UBY9 170 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 PSG11Q9UQ72 335 aa8.4□□□□□ -1.06
PHGDH-224ENST00000641711 CARHSP1Q9Y2V2 147 aaKnown RBP8.4□□□□□ -1.06
PHGDH-224ENST00000641711 VPS13CQ709C8 3753 aa8.4□□□□□ -1.07
PHGDH-224ENST00000641711 TRBV23-1A0A0A0MS06 115 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 IGHV3-43A0A0B4J1X8 118 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 KBTBD11-OT1A0A1B0GTJ5 212 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 FAM90A9PA6NNJ1 464 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 C17orf98A8MV24 154 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 FAM157AC9JC47 383 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 TMPRSS2O15393 492 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 ST8SIA5O15466 376 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 NDUFB3O43676 98 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 ENSAO43768 121 aaKnown RBP8.39□□□□□ -1.07
PHGDH-224ENST00000641711 RAMP3O60896 148 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 GYPAP02724 150 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 CD5P06127 495 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 LIPFP07098 398 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 IGHV3-43DP0DP04 118 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 ATP6V0CP27449 155 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 DUTP33316 252 aaKnown RBP8.39□□□□□ -1.07
PHGDH-224ENST00000641711 GPR12P47775 334 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 RAB7AP51149 207 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 TNFRSF9Q07011 255 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 CLINT1Q14677 625 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 IZUMO4Q1ZYL8 232 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 AARDQ4LEZ3 155 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 ZNF841Q6ZN19 808 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-224ENST00000641711 C8orf46Q8TAG6 207 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 TCTEX1D2Q8WW35 142 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 TMEM186Q96B77 213 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-224ENST00000641711 GFOD1Q9NXC2 390 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 GNG12Q9UBI6 72 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 ARHGAP32A7KAX9 2087 aa8.39□□□□□ -1.07
PHGDH-224ENST00000641711 FN1P02751 2386 aaKnown RBP8.38□□□□□ -1.07
PHGDH-224ENST00000641711 TRGV10A0A0A0MS01 117 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 A0A1B0GW64 132 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 ZNF729A6NN14 1252 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-224ENST00000641711 LINC00473A8K010 186 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 RNASEK-C17orf49H0YIS7 233 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 PROP1O75360 226 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 CST7O76096 145 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 S1PR2O95136 353 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 LY86O95711 162 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 TGFAP01135 160 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 APOC3P02656 99 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 OR8U8P0C7N1 319 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 PPIAL4GP0DN37 164 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 HNF1AP20823 631 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 OMGP23515 440 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 KIR2DS2P43631 304 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 CAMLGP49069 296 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 EDDM3BP56851 147 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 UBE2KP61086 200 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 Q3ZCU0 254 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 BTNL3Q6UXE8 466 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 TMEM14EPQ6UXP3 125 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 DPPA3Q6W0C5 159 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 HSD17B11Q8NBQ5 300 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 MAPK1IP1LQ8NDC0 245 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 LFNGQ8NES3 379 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 OR10A7Q8NGE5 316 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
PHGDH-224ENST00000641711 PARD6GQ9BYG4 376 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-224ENST00000641711 SH3BGRL3Q9H299 93 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms