RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 WIPF3A6NGB9 483 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 DKK1O94907 266 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 SP1P08047 785 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 B3GALT5-AS1P59052 145 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 KRTAP27-1Q3LI81 207 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF468Q5VIY5 522 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 ACP7Q6ZNF0 438 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 FAM214BQ7L5A3 538 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 RNF144BQ7Z419 303 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 Q8NFD4 153 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 MAFAQ8NHW3 353 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF488Q96MN9 340 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 NPVFQ9HCQ7 196 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 A0A1W2PN81 502 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 FAM157AC9JC47 383 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 SLC31A2O15432 143 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 CRISP2P16562 243 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 WDFY1Q8IWB7 410 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 TINAGQ9UJW2 476 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 COL27A1Q8IZC6 1860 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 COX7A2P2O60397 106 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 S1PR2O95136 353 aa4.71□□□□□ -1.66
SCN3A-210ENST00000640652 BHLHA15Q7RTS1 189 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 KLF14Q8TD94 323 aaPredicted RBP4.71□□□□□ -1.66
SCN3A-210ENST00000640652 KIAA1324LA8MWY0 1029 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 HIST3H2BBQ8N257 126 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 OR5AU1Q8NGC0 362 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 OR1L1Q8NH94 360 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 TMEM68Q96MH6 324 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 IL19Q9UHD0 177 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PRRC2AP48634 2157 aaKnown RBP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 ODAMA1E959 279 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 M0R1B8 84 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 IGHV2-70P01814 119 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 ERVFRD-1P60508 538 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PLGLAQ15195 96 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PQLC2Q6ZP29 291 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 RAB1CQ92928 201 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 SFXN3Q9BWM7 321 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 ARRDC1-AS1Q9H2J1 176 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PRO1933Q9H354 126 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 NAGKQ9UJ70 344 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PXMP4Q9Y6I8 212 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 ARL2-SNX15V9GYD0 113 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 USP9YO00507 2555 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 hADV38S2A0JD32 116 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 IQCF6A8MYZ5 107 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 RBFOX2O43251 390 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 RHBDL1O75783 438 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 COL10A1Q03692 680 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 SPINK9Q5DT21 86 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 VHLLQ6RSH7 139 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 OR52E5Q8NH55 327 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 LOXL4Q96JB6 756 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 HIST1H2BLQ99880 126 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PARD6AQ9NPB6 346 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 SMPD2O60906 423 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 CCL11P51671 97 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 STPG3Q8N7X2 389 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 RNF24Q9Y225 148 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 PRR33A8MZF0 331 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 LRRC10Q5BKY1 277 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 OR1L4Q8NGR5 311 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 BSCL2Q96G97 398 aaPredicted RBP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 GPR61Q9BZJ8 451 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 C5orf63A6NC05 138 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 NDUFB4O95168 129 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 CRYABP02511 175 aaKnown RBP4.7□□□□□ -1.66
SCN3A-210ENST00000640652 WNT2P09544 360 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 AMTP48728 403 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 RND2P52198 227 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 GAMTQ14353 236 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 ACTL10Q5JWF8 245 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 COLCA1Q6ZS62 124 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 UBALD1Q8TB05 177 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 SSMEM1Q8WWF3 244 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 MEGF10Q96KG7 1140 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 SIGLEC12Q96PQ1 595 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 IL36RNQ9UBH0 155 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 TMEM14EPQ6UXP3 125 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 VASH2Q86V25 355 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 RFESDQ8TAC1 157 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 OR51B2Q9Y5P1 312 aa4.7□□□□□ -1.66
SCN3A-210ENST00000640652 C10orf142B7Z368 130 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 LYG1Q8N1E2 194 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 BMPERQ8N8U9 685 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 OR4B1Q8NGF8 309 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 RHOVQ96L33 236 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 TMEM140Q9NV12 185 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 A0A1W2PR80 420 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 ISLRO14498 428 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 MGST3O14880 152 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 ASCL5Q7RTU5 278 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 GCSAMQ8N6F7 178 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 RPLP1P05386 114 aaKnown RBP4.69□□□□□ -1.66
SCN3A-210ENST00000640652 JPT1Q9UK76 154 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 IGHV3-43A0A0B4J1X8 118 aa4.69□□□□□ -1.66
SCN3A-210ENST00000640652 TRAV38-1A0A0B4J264 116 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms