RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 OR4C13Q8NGP0 309 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 OSR1Q8TAX0 266 aaPredicted RBP7.05□□□□□ -1.28
HLA-B-258ENST00000640615 R3HDM4Q96D70 268 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 RRNAD1Q96FB5 475 aaKnown RBP7.05□□□□□ -1.28
HLA-B-258ENST00000640615 RITA1Q96K30 269 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 HARBI1Q96MB7 349 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 MEGF9Q9H1U4 602 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 RAB18Q9NP72 206 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 COMMD9Q9P000 198 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 TMED3Q9Y3Q3 217 aa7.05□□□□□ -1.28
HLA-B-258ENST00000640615 MDFIC2A0A1B0GVS7 189 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 DUXBA0A1W2PPF3 345 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 MARCH11A6NNE9 402 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 SRRM4A7MD48 611 aaKnown RBP7.04□□□□□ -1.28
HLA-B-258ENST00000640615 VENTXO95231 258 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 MOSP00540 346 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 IGKV1-5P01602 117 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 FAM106CPP0CH98 169 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 CXCL3P19876 107 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 HNF1AP20823 631 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 VDAC1P21796 283 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 DEFB112Q30KQ8 113 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 CLEC9AQ6UXN8 241 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 GSG1LQ6UXU4 331 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 H2BFWTQ7Z2G1 175 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 OR2T10Q8NGZ9 312 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 LSM10Q969L4 123 aaKnown RBP7.04□□□□□ -1.28
HLA-B-258ENST00000640615 ZDHHC16Q969W1 377 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 GPR146Q96CH1 333 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 SEC22AQ96IW7 307 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 EAF1Q96JC9 268 aaPredicted RBP7.04□□□□□ -1.28
HLA-B-258ENST00000640615 AIFM2Q9BRQ8 373 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 PDCD10Q9BUL8 212 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 CHIAQ9BZP6 476 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 MMP24Q9Y5R2 645 aa7.04□□□□□ -1.28
HLA-B-258ENST00000640615 A0A0G2JRQ6 117 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 FAM90A9PA6NNJ1 464 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 MPTX1A8MV57 137 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 TRAPPC2P0DI81 140 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 TRAPPC2BP0DI82 140 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 TMEM11P17152 192 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 HLA-GP17693 338 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 LGALS7P47929 136 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 CD83Q01151 205 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 IZUMO4Q1ZYL8 232 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 IAH1Q2TAA2 248 aaPredicted RBP7.03□□□□□ -1.28
HLA-B-258ENST00000640615 LRRC75BQ2VPJ9 315 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 VMA21Q3ZAQ7 101 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 NMSQ5H8A3 153 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 THOC7Q6I9Y2 204 aaKnown RBP7.03□□□□□ -1.28
HLA-B-258ENST00000640615 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 THNSL2Q86YJ6 484 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 OR5M8Q8NGP6 311 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 CHAC2Q8WUX2 184 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 OR10C1Q96KK4 312 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 RHOVQ96L33 236 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 TSNAXQ99598 290 aaKnown RBP7.03□□□□□ -1.28
HLA-B-258ENST00000640615 SPIN2AQ99865 258 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 SSX3Q99909 188 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 RNF5Q99942 180 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 SPIN2BQ9BPZ2 258 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 ZNF436Q9C0F3 470 aaPredicted RBP7.03□□□□□ -1.28
HLA-B-258ENST00000640615 TMEM140Q9NV12 185 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 GSKIPQ9P0R6 139 aa7.03□□□□□ -1.28
HLA-B-258ENST00000640615 FN1P02751 2386 aaKnown RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 NCBP2LA6PVI3 153 aaKnown RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 SLC25A17O43808 307 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 PFDN1O60925 122 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 RBMXL2O75526 392 aaKnown RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 CCNKO75909 580 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 SNAPC5O75971 98 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 IGLV2-23P01705 113 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 SAA1P0DJI8 122 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 CNTFRP26992 372 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 DYNLT3P51808 116 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 F2RL1P55085 397 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 H2BFSP57053 126 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 UBE2KP61086 200 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 EBI3Q14213 229 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 SMCO1Q147U7 214 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 PLGLAQ15195 96 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 PSG5Q15238 335 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 MMDQ15546 238 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 POU2AF1Q16633 256 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 FBLN7Q53RD9 439 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 OR4A47Q6IF82 309 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 Q6ZRM9 215 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 Q71RC1 249 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 AKAP14Q86UN6 197 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 FAM219AQ8IW50 185 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 ZBTB8BQ8NAP8 495 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 OR4A16Q8NH70 328 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 OR1S1Q8NH92 325 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 VSTM2AQ8TAG5 236 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 PIFOQ8TCI5 191 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 WDR89Q96FK6 387 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 C2orf50Q96LR7 162 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 RANBP3Q9H6Z4 567 aaPredicted RBP7.02□□□□□ -1.29
HLA-B-258ENST00000640615 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
HLA-B-258ENST00000640615 METTL1Q9UBP6 276 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms