RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 H7C2G1 150 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 K7ERQ8 282 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 YKT6O15498 198 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 LGALS1P09382 135 aaKnown RBP0.56□□□□□ -2.32
AP3S1-209ENST00000640413 TRGC1P0CF51 173 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 CXCL2P19875 107 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 CXCL3P19876 107 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 MIPP30301 263 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 SLCO1A2P46721 670 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 REG1BP48304 166 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 SNAP25P60880 206 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 HLA-DRB3P79483 266 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 AKR1C1Q04828 323 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 EBPQ15125 230 aaKnown RBP0.56□□□□□ -2.32
AP3S1-209ENST00000640413 DEFB115Q30KQ5 88 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 ARHGAP11BQ3KRB8 267 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 FAM173BQ6P4H8 233 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 SYCE1Q8N0S2 351 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 OR10D3Q8NH80 312 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 SLC37A2Q8TED4 501 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 RAB2BQ8WUD1 216 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 ANKRD36BP1Q96IX9 119 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 NDEL1Q9GZM8 345 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 CD300AQ9UGN4 299 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 NAT8Q9UHE5 227 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 NAV1Q8NEY1 1877 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 MYH11P35749 1972 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 CHD5Q8TDI0 1954 aa0.56□□□□□ -2.32
AP3S1-209ENST00000640413 TRAV7A0A075B6U4 112 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 IGKV1-9A0A0C4DH69 117 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 TMEM269A0A1B0GVZ9 245 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 ERICH2A1L162 156 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 FTCDNL1E5RQL4 147 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 BRI3O95415 125 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 IL6P05231 212 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 RPL28P46779 137 aaKnown RBP0.55□□□□□ -2.32
AP3S1-209ENST00000640413 RAB14P61106 215 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 C4orf26Q17RF5 130 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 LFNGQ8NES3 379 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 ODF3Q96PU9 254 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 RBM7Q9Y580 266 aaKnown RBP0.55□□□□□ -2.32
AP3S1-209ENST00000640413 DICER1Q9UPY3 1922 aaKnown RBP0.55□□□□□ -2.32
AP3S1-209ENST00000640413 NUMA1Q14980 2115 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 CUL9Q8IWT3 2517 aa0.55□□□□□ -2.32
AP3S1-209ENST00000640413 RTTNQ86VV8 2226 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 PTPRBP23467 1997 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 TMED7-TICAM2A0A0A6YYA0 188 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 TEX50A0A1B0GTY4 177 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 TRAPPC13A5PLN9 417 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 MEIS3P1A6NDR6 274 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 TRPC5OSA6NMA1 111 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 C9JCJ5 164 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 MKRN2OSH3BPM6 223 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 TOX3O15405 576 aaPredicted RBP0.54□□□□□ -2.32
AP3S1-209ENST00000640413 ATP8B1O43520 1251 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 SCN2BO60939 215 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 ORM1P02763 201 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 MSNP26038 577 aaKnown RBP0.54□□□□□ -2.32
AP3S1-209ENST00000640413 CD40LGP29965 261 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 HADHBP55084 474 aaKnown RBP0.54□□□□□ -2.32
AP3S1-209ENST00000640413 FKBP1AP62942 108 aaKnown RBP0.54□□□□□ -2.32
AP3S1-209ENST00000640413 PMS2P3Q13401 168 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 CDK10Q15131 360 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 Q1T7F1 81 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 PLPPR5Q32ZL2 321 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 KIAA2026Q5HYC2 2103 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 SAPCD1Q5SSQ6 148 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 DCXRQ7Z4W1 244 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 RIBC1Q8N443 379 aaPredicted RBP0.54□□□□□ -2.32
AP3S1-209ENST00000640413 UBL4BQ8N7F7 174 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 TESCQ96BS2 214 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 DCUN1D5Q9BTE7 237 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 OR52A5Q9H2C5 316 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 SIPA1L1O43166 1804 aa0.54□□□□□ -2.32
AP3S1-209ENST00000640413 CPAMD8Q8IZJ3 1885 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 COX7A2LO14548 114 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 HCRTO43612 131 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 EVX1P49640 407 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 CLDN12P56749 244 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 JOSD1Q15040 202 aaPredicted RBP0.53□□□□□ -2.32
AP3S1-209ENST00000640413 NDUFA5Q16718 116 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 GPHB5Q86YW7 130 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 DYNAPQ8N1N2 210 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 TBC1D19Q8N5T2 526 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 C15orf53Q8NAA6 179 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 OR5L1Q8NGL2 311 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 ACOT12Q8WYK0 555 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 CCL13Q99616 98 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 DHRS9Q9BPW9 319 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 CHST6Q9GZX3 395 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 SPACA1Q9HBV2 294 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 HES4Q9HCC6 221 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 HRASLSQ9HDD0 168 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 C22orf24Q9Y442 160 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 ABCC12Q96J65 1359 aa0.53□□□□□ -2.32
AP3S1-209ENST00000640413 SCAF11Q99590 1463 aaKnown RBP0.53□□□□□ -2.33
AP3S1-209ENST00000640413 GPR98Q8WXG9 6306 aa0.53□□□□□ -2.33
AP3S1-209ENST00000640413 A0A1B0GW54 56 aa0.52□□□□□ -2.33
AP3S1-209ENST00000640413 SDCBPO00560 298 aaPredicted RBP0.52□□□□□ -2.33
AP3S1-209ENST00000640413 PLA2G10O15496 165 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms