RNA–Protein interactions for RNA: ENST00000639594.1

CROCCP2-206, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 1 (best)

Gene CROCCP2, Length 2,175 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-206ENST00000639594 C17orf58Q2M2W7 97 aa15.64■□□□□ 0.09
CROCCP2-206ENST00000639594 PRAMEF5Q5TYX0 476 aa15.64■□□□□ 0.09
CROCCP2-206ENST00000639594 DUX4L9Q6RFH8 374 aaPredicted RBP15.64■□□□□ 0.09
CROCCP2-206ENST00000639594 MAP1BP46821 2468 aaKnown RBP15.64■□□□□ 0.09
CROCCP2-206ENST00000639594 PLCE1Q9P212 2302 aa15.64■□□□□ 0.09
CROCCP2-206ENST00000639594 MBP02144 154 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 PNRC1Q12796 327 aaPredicted RBP15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 AARDQ4LEZ3 155 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 WDR25Q64LD2 544 aaPredicted RBP15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 GATAD1Q8WUU5 269 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 CEACAM8P31997 349 aaPredicted RBP15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 ZNF674Q2M3X9 581 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 ZNF709Q8N972 641 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 OR4A16Q8NH70 328 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 PTPRQQ9UMZ3 2332 aa15.63■□□□□ 0.09
CROCCP2-206ENST00000639594 TRAV3A0A0B4J244 114 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 FAM90A9PA6NNJ1 464 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 CRYABP02511 175 aaKnown RBP15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 DEFA4P12838 97 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 MEF2BQ02080 365 aaPredicted RBP15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 SPACA3Q8IXA5 215 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 FAM222BQ8WU58 562 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 FAM216AQ8WUB2 273 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 RAB24Q969Q5 203 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 SFXN3Q9BWM7 321 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 ACTR3CQ9C0K3 210 aaPredicted RBP15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 GCM1Q9NP62 436 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 SSUH2Q9Y2M2 353 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 CYB5R3P00387 301 aaPredicted RBP15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 S100A8P05109 93 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 GATA4P43694 442 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 SPCS3P61009 180 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 ZGRF1Q86YA3 2104 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 Q8N7P7 452 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 S1PR3Q99500 378 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 RNF7Q9UBF6 113 aa15.62■□□□□ 0.09
CROCCP2-206ENST00000639594 CYB5BO43169 146 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 RBFOX2O43251 390 aaKnown RBP eCLIP15.61■□□□□ 0.095e-7■■□□□ 13.9
CROCCP2-206ENST00000639594 IGHV1-46P01743 117 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 TNFAIP6P98066 277 aaPredicted RBP15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 RELBQ01201 579 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 KIAA0141Q14154 515 aaPredicted RBP15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 SLC16A13Q7RTY0 426 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 FAM57AQ8TBR7 257 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 DDB2Q92466 427 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 MSRB2Q9Y3D2 182 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 PIEZO1Q92508 2521 aa15.61■□□□□ 0.09
CROCCP2-206ENST00000639594 A8MXE2 369 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 C17orf112F2Z3M2 114 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 BMP5P22003 454 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 PSMB3P49720 205 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 ERVK-16P61578 105 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 CT45A1Q5HYN5 189 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 DEFB108BQ8NET1 73 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 CT45A3Q8NHU0 189 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 GFOD1Q9NXC2 390 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 IFNA10P01566 189 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 CD1BP29016 333 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 VDAC2P45880 294 aaPredicted RBP15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 NCMAPQ5T1S8 102 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 SSX3Q99909 188 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 SMIM7Q9BQ49 75 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 NCOR1P1Q9H4R4 102 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 TMEM140Q9NV12 185 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 IL19Q9UHD0 177 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 WDR83OSQ9Y284 106 aa15.6■□□□□ 0.09
CROCCP2-206ENST00000639594 CLDN34H7C241 214 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 RRHO14718 337 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 CD40P25942 277 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 RND2P52198 227 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 STUMQ69YW2 141 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 TGIF2LYQ8IUE0 185 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 NANPQ8TBE9 248 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 SDSLQ96GA7 329 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 HEYLQ9NQ87 328 aaPredicted RBP15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 TMEM242Q9NWH2 141 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 KBTBD11-OT1A0A1B0GTJ5 212 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 SELENOVP59797 346 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 OR52E5Q8NH55 327 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 RPUSD4Q96CM3 377 aaKnown RBP15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 GAFA1Q96PS6 74 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 NAT8Q9UHE5 227 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 GAB2Q9UQC2 676 aa15.59■□□□□ 0.09
CROCCP2-206ENST00000639594 SAA2-SAA4A0A096LPE2 208 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 ITGB1BP1O14713 200 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 SMIM6P0DI80 62 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 SAA2P0DJI9 122 aaPredicted RBP15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 KIR2DS2P43631 304 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 RAB7AP51149 207 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 ACOT6Q3I5F7 207 aaPredicted RBP15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 KRTCAP3Q53RY4 240 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 TCF23Q7RTU1 214 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 CCL13Q99616 98 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 SMCO3A2RU48 225 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 CLN5O75503 358 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 CDC34P49427 236 aaPredicted RBP15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 TMEM241Q24JQ0 296 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 PDLIM3Q53GG5 364 aaPredicted RBP15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 GCSAMLQ5JQS6 135 aa15.58■□□□□ 0.08
CROCCP2-206ENST00000639594 ABHD12Q8N2K0 398 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms