RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 OVCH2Q7RTZ1 564 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 SECTM1Q8WVN6 248 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 S100A16Q96FQ6 103 aaKnown RBP12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 COA4Q9NYJ1 87 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 TAS2R8Q9NYW2 309 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 TNCP24821 2201 aa12.93□□□□□ -0.34
CACNA1A-259ENST00000638114 A0A0G2JLM5 398 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 MEIS3P1A6NDR6 274 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 MPPED1O15442 326 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 XRCC3O43542 346 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 CREBL2O60519 120 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 ACTL6BO94805 426 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 LY86O95711 162 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 DEFA5Q01523 94 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 SAMD12Q8N8I0 201 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 OR13F1Q8NGS4 319 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 OR4S2Q8NH73 311 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 SRSF12Q8WXF0 261 aaKnown RBP12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 ZNF430Q9H8G1 570 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 IFT46Q9NQC8 304 aa12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
CACNA1A-259ENST00000638114 PPYP01298 95 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 EIF4EBP1Q13541 118 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 ZNF66Q6ZN08 573 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 MMD2Q8IY49 270 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 VKORC1L1Q8N0U8 176 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 MFSD4AQ8N468 514 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 SNAPC3Q92966 411 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 GPHA2Q96T91 129 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 B9D2Q9BPU9 175 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 TINAGL1Q9GZM7 467 aaPredicted RBP12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 CCL28Q9NRJ3 127 aa12.91□□□□□ -0.34
CACNA1A-259ENST00000638114 COL7A1Q02388 2944 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 ANKRD34BA5PLL1 514 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 TNFSF12O43508 249 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 FXYD4P59646 89 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 NCS1P62166 190 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 TMEM69Q5SWH9 247 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 OR5AP2Q8NGF4 316 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 FUNDC2Q9BWH2 189 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 SLC5A7Q9GZV3 580 aa12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 RANGRFQ9HD47 186 aaPredicted RBP12.9□□□□□ -0.34
CACNA1A-259ENST00000638114 TRIM64CA6NLI5 447 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 OR9G9P0C7N8 305 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 TAS2R20P59543 309 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 MSMO1Q15800 293 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 C10orf55Q5SWW7 151 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 C11orf87Q6NUJ2 197 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 ACSM6Q6P461 480 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 ADAD2Q8NCV1 583 aaKnown RBP12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 VSTM2AQ8TAG5 236 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 SLC25A46Q96AG3 418 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 SPIN2AQ99865 258 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 SPIN2BQ9BPZ2 258 aa12.89□□□□□ -0.35
CACNA1A-259ENST00000638114 SORL1Q92673 2214 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 KBTBD11O94819 623 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 OR2A4O95047 310 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 BRI3O95415 125 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 ZP3P21754 424 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 KIR2DS2P43631 304 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 BRWD1-AS2P59051 145 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 VBP1P61758 197 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 DYRK1AQ13627 763 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 SSX9Q7RTT3 188 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 TMEM17Q86X19 198 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 ZBTB34Q8NCN2 500 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 GIMAP1Q8WWP7 306 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 KCTD12Q96CX2 325 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 USMG5Q96IX5 58 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 OR2A7Q96R45 310 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 OR4C12Q96R67 309 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 EHFQ9NZC4 300 aa12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 LSM4Q9Y4Z0 139 aaKnown RBP12.88□□□□□ -0.35
CACNA1A-259ENST00000638114 HRASP01112 189 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 EIF4EP06730 217 aaKnown RBP12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 HERV-K104P61576 105 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 VAX1Q5SQQ9 334 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 SPAG16Q8N0X2 631 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 OR6Q1Q8NGQ2 317 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 TMEM167AQ8TBQ9 72 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 ELOVL1Q9BW60 279 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 COMMD3Q9UBI1 195 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 DNAH9Q9NYC9 4486 aa12.87□□□□□ -0.35
CACNA1A-259ENST00000638114 SULT1C2O00338 296 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 RBMXL2O75526 392 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 PRH1P02810 166 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 SPNP16150 400 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 PRSS3P35030 304 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 CATR1Q13166 79 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 ZNF343Q6P1L6 599 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 PUSL1Q8N0Z8 303 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 RSRP1Q9BUV0 290 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 PEF1Q9UBV8 284 aaKnown RBP12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 ANAPC10Q9UM13 185 aa12.86□□□□□ -0.35
CACNA1A-259ENST00000638114 HMX3A6NHT5 357 aa12.85□□□□□ -0.35
CACNA1A-259ENST00000638114 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
CACNA1A-259ENST00000638114 TRBV12-3P01733 135 aa12.85□□□□□ -0.35
CACNA1A-259ENST00000638114 PMP2P02689 132 aa12.85□□□□□ -0.35
CACNA1A-259ENST00000638114 RPL27AP46776 148 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms