RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CCL28Q9NRJ3 127 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 COA4Q9NYJ1 87 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 ADAM30Q9UKF2 790 aa13.63□□□□□ -0.23
PNKP-230ENST00000638016 A0A087WXM4 84 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 FCGR2CP31995 323 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 C19orf35Q6ZS72 473 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 OVCH2Q7RTZ1 564 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 OR13F1Q8NGS4 319 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 OSR1Q8TAX0 266 aaPredicted RBP13.62□□□□□ -0.23
PNKP-230ENST00000638016 SECTM1Q8WVN6 248 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 TCTEX1D2Q8WW35 142 aa13.62□□□□□ -0.23
PNKP-230ENST00000638016 ZNF256Q9Y2P7 627 aaPredicted RBP13.62□□□□□ -0.23
PNKP-230ENST00000638016 TNFAIP8O95379 198 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 SPNP16150 400 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 CD40LGP29965 261 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 NCS1P62166 190 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 TIMM50Q3ZCQ8 353 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 ACSM6Q6P461 480 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 ADAD2Q8NCV1 583 aaKnown RBP13.61□□□□□ -0.23
PNKP-230ENST00000638016 TINAGL1Q9GZM7 467 aaPredicted RBP13.61□□□□□ -0.23
PNKP-230ENST00000638016 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
PNKP-230ENST00000638016 C13orf42A0A1B0GVH6 325 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 PPYP01298 95 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 MYOD1P15172 320 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 FXYD4P59646 89 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 CDK10Q15131 360 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 VAX1Q5SQQ9 334 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 MFSD4AQ8N468 514 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 SAMD12Q8N8I0 201 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 ASCL2Q99929 193 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 PRELID3BQ9Y3B1 194 aa13.6□□□□□ -0.23
PNKP-230ENST00000638016 A0A0A6YYH2 397 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 A0A1B0GW64 132 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 HMX3A6NHT5 357 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 A6NJ64 397 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 E7EUB6 86 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 H3BUA1 57 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 ZNF45Q02386 682 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 SSX9Q7RTT3 188 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 HSD17B10Q99714 261 aaKnown RBP13.59□□□□□ -0.23
PNKP-230ENST00000638016 FUNDC2Q9BWH2 189 aa13.59□□□□□ -0.23
PNKP-230ENST00000638016 ZMAT5Q9UDW3 170 aaKnown RBP13.59□□□□□ -0.23
PNKP-230ENST00000638016 MRPS7Q9Y2R9 242 aaKnown RBP13.59□□□□□ -0.23
PNKP-230ENST00000638016 TRIM64CA6NLI5 447 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 MPPED1O15442 326 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 XRCC3O43542 346 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 EIF4EP06730 217 aaKnown RBP13.58□□□□□ -0.24
PNKP-230ENST00000638016 OR9G9P0C7N8 305 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 INSL3P51460 131 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 TAS2R20P59543 309 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 VBP1P61758 197 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 ZNF429Q86V71 674 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 TMEM17Q86X19 198 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 OR4S2Q8NH73 311 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 SLC5A7Q9GZV3 580 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 VCX3AQ9NNX9 186 aa13.58□□□□□ -0.24
PNKP-230ENST00000638016 SLC22A5O76082 557 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 KBTBD11O94819 623 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 SMIM18P0DKX4 95 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 TMEM69Q5SWH9 247 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 ZNF818PQ6ZRF7 136 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 MMD2Q8IY49 270 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 PUSL1Q8N0Z8 303 aaKnown RBP13.57□□□□□ -0.24
PNKP-230ENST00000638016 TMEM68Q96MH6 324 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 RSRP1Q9BUV0 290 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 NAA50Q9GZZ1 169 aaKnown RBP13.57□□□□□ -0.24
PNKP-230ENST00000638016 RANGRFQ9HD47 186 aaPredicted RBP13.57□□□□□ -0.24
PNKP-230ENST00000638016 AKIP1Q9NQ31 210 aa13.57□□□□□ -0.24
PNKP-230ENST00000638016 TEX22C9J3V5 150 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 SULT1C2O00338 296 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 ACTL6BO94805 426 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 IL6RP08887 468 aaPredicted RBP13.56□□□□□ -0.24
PNKP-230ENST00000638016 RFX2P48378 723 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 RHOGP84095 191 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 ZNF343Q6P1L6 599 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 ZNF66Q6ZN08 573 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 OR5AP2Q8NGF4 316 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 SLC25A46Q96AG3 418 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 S100A16Q96FQ6 103 aaKnown RBP13.56□□□□□ -0.24
PNKP-230ENST00000638016 IFT46Q9NQC8 304 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 ANAPC10Q9UM13 185 aa13.56□□□□□ -0.24
PNKP-230ENST00000638016 A0A0G2JLM5 398 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 OR2A4O95047 310 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 BRI3O95415 125 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 PMP2P02689 132 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 GP9P14770 177 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 SYNJ2BPP57105 145 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 IL34Q6ZMJ4 242 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 CROCCP3Q8IVE0 287 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 SPAG16Q8N0X2 631 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 OR51H1Q8NH63 302 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 TMEM167AQ8TBQ9 72 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 FYTTD1Q96QD9 318 aaKnown RBP13.55□□□□□ -0.24
PNKP-230ENST00000638016 OR2A7Q96R45 310 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 OR4C12Q96R67 309 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 EHFQ9NZC4 300 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 COMMD3Q9UBI1 195 aa13.55□□□□□ -0.24
PNKP-230ENST00000638016 PEF1Q9UBV8 284 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms