RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 INO80EQ8NBZ0 244 aaPredicted RBP12.45□□□□□ -0.42
CLN6-219ENST00000637329 AQP10Q96PS8 301 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 MFFQ9GZY8 342 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 OR5AC2Q9NZP5 309 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 RCL1Q9Y2P8 373 aaKnown RBP12.45□□□□□ -0.42
CLN6-219ENST00000637329 NSG2Q9Y328 171 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 WASHC3Q9Y3C0 194 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 MINOS1-NBL1R4GNA1 71 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 DOCK11Q5JSL3 2073 aa12.45□□□□□ -0.42
CLN6-219ENST00000637329 YLPM1P49750 1951 aaKnown RBP12.45□□□□□ -0.42
CLN6-219ENST00000637329 RNF222A6NCQ9 220 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 LY6LH3BQJ8 138 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 MSMBP08118 114 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 CD99P14209 185 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 CXCL2P19875 107 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 GATA3P23771 443 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 ID3Q02535 119 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 LGALSLQ3ZCW2 172 aaPredicted RBP12.44□□□□□ -0.42
CLN6-219ENST00000637329 MIDNQ504T8 468 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 TPTE2P1Q5T6R2 138 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 ACOT7LQ6ZUV0 252 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 FOXRED2Q8IWF2 684 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 OR8H3Q8N146 312 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 DMBX1Q8NFW5 382 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 RPEQ96AT9 228 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 MMP26Q9NRE1 261 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.44□□□□□ -0.42
CLN6-219ENST00000637329 DPM3Q9P2X0 92 aa12.44□□□□□ -0.42
CLN6-219ENST00000637329 TBL2Q9Y4P3 447 aaKnown RBP12.44□□□□□ -0.42
CLN6-219ENST00000637329 LSM5Q9Y4Y9 91 aaKnown RBP12.44□□□□□ -0.42
CLN6-219ENST00000637329 TRAV20A0A0B4J274 112 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 B4DSR2 109 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 WRBO00258 174 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 FGF2P09038 288 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 S100A11P31949 105 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 P2RY1P47900 373 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 UBE2E1P51965 193 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 PAX8Q06710 450 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
CLN6-219ENST00000637329 Q5PR19 223 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 CCDC144NLQ6NUI1 221 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 KCNRGQ8N5I3 272 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 OR4C13Q8NGP0 309 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 RHOVQ96L33 236 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 TBX15Q96SF7 602 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 GON7Q9BXV9 100 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 C11orf1Q9H5F2 150 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 LPAR2Q9HBW0 351 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 PLSCR3Q9NRY6 295 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 TMEM140Q9NV12 185 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 HSPB7Q9UBY9 170 aa12.43□□□□□ -0.42
CLN6-219ENST00000637329 DNHD1Q96M86 4753 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 AKAP6Q13023 2319 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 IGHV1-3A0A0C4DH29 117 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 RNASEK-C17orf49H0YIS7 233 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 H7C2Y5 167 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 MED6O75586 246 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 LY86O95711 162 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 IGKV1-16P04430 117 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 REG1BP48304 166 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 DLX1P56177 255 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 TNFRSF9Q07011 255 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 KLRD1Q13241 179 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 DIAPH2-AS1Q14236 149 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 Q6ZRM9 215 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 VSTM2AQ8TAG5 236 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 LHX4Q969G2 390 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 FLYWCH2Q96CP2 140 aaKnown RBP12.42□□□□□ -0.42
CLN6-219ENST00000637329 HARBI1Q96MB7 349 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 RAB40CQ96S21 281 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 SLA2Q9H6Q3 261 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 BET1LQ9NYM9 111 aa12.42□□□□□ -0.42
CLN6-219ENST00000637329 A0A1W2PPI3 338 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 SHOXO15266 292 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 SSSCA1O60232 199 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 TAS2R30P59541 319 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 HABP2Q14520 560 aaPredicted RBP12.41□□□□□ -0.42
CLN6-219ENST00000637329 PDLIM3Q53GG5 364 aaPredicted RBP12.41□□□□□ -0.42
CLN6-219ENST00000637329 CXorf66Q5JRM2 361 aaPredicted RBP12.41□□□□□ -0.42
CLN6-219ENST00000637329 TMUB2Q71RG4 321 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 ZNF429Q86V71 674 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 OR4A5Q8NH83 315 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 ARL6Q9H0F7 186 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 WSB1Q9Y6I7 421 aa12.41□□□□□ -0.42
CLN6-219ENST00000637329 C15orf61A6NNL5 157 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 BCL2L11O43521 198 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 SYNGR2O43760 224 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 GPR137BO60478 399 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 LGALS7P47929 136 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 LGALS4P56470 323 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 POLR2GP62487 172 aaKnown RBP eCLIP12.4□□□□□ -0.42
CLN6-219ENST00000637329 VAMP2P63027 116 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 OPCMLQ14982 345 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 IZUMO4Q1ZYL8 232 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 GPR157Q5UAW9 335 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 OR4A47Q6IF82 309 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 OR52E5Q8NH55 327 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 OR4A16Q8NH70 328 aa12.4□□□□□ -0.42
CLN6-219ENST00000637329 RNF5Q99942 180 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms