RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 KIAA1549Q9HCM3 1950 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 HNF1AP20823 631 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 CD1BP29016 333 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 RPS16P62249 146 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 ZNF816Q0VGE8 651 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 SLC23A3Q6PIS1 610 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 ZDHHC16Q969W1 377 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 TMEM45BQ96B21 275 aa13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 ZNF703Q9H7S9 590 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-235ENST00000637004 RAB29O14966 203 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 MPDU1O75352 247 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 MRPL33O75394 65 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 TRAPPC6AO75865 159 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 GPX1P07203 203 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 MMDQ15546 238 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 TRIP6Q15654 476 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 UBALD1Q8TB05 177 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 ABHD3Q8WU67 409 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 GAL3ST2Q9H3Q3 398 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 MBNL3Q9NUK0 354 aaKnown RBP13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 ZNF407Q9C0G0 2248 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 SS18L1O75177 396 aaPredicted RBP13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 CLDN14O95500 239 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 CXorf1O96002 111 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 THBS3P49746 956 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 EDDM3BP56851 147 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 SPATA45Q537H7 98 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 GCSAMLQ5JQS6 135 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 H2BFWTQ7Z2G1 175 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 Q8N7P7 452 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 ORAOV1Q8WV07 137 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 TMEM204Q9BSN7 226 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 FBXL7Q9UJT9 491 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 LAMA5O15230 3695 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 ARHGAP21Q5T5U3 1957 aa13.04□□□□□ -0.32
CACNA1A-235ENST00000637004 A0A096LPE4 126 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 A0A1W2PPZ6 126 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 J3QT63 122 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 SIRPB1O00241 398 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 P04436 131 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 COX6A1P12074 109 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 CTRLP40313 264 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 LGALS4P56470 323 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 IGHV5-10-1A0A0J9YXX1 117 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 SCO2A0A1W2PP80 73 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 SNURFLB1AK76 121 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 S1PR2O95136 353 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 NGFP01138 241 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 ARL14EPLP0DKL9 152 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 IER3P46695 156 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 TXN2Q99757 166 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 GNB1LQ9BYB4 327 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 KMT2EQ8IZD2 1858 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 RHBDL1O75783 438 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 OR2H2O95918 312 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 RPEL1Q2QD12 228 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 HLA-DRB5Q30154 266 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 TCTEX1D1Q8N7M0 179 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 RNASE8Q8TDE3 154 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 STARD4Q96DR4 205 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 FAM103A1Q9BTL3 118 aaKnown RBP13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 PRRG4Q9BZD6 226 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 LINC00470Q9BZP3 86 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 OR2D2Q9H210 308 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 KCNIP1Q9NZI2 227 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 LY96Q9Y6Y9 160 aa13.03□□□□□ -0.32
CACNA1A-235ENST00000637004 ZNHIT1O43257 154 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 GDF9O60383 454 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 NXPH2O95156 264 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 MT-ND6P03923 174 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 OR5G3P0C626 314 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 OPRK1P41145 380 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 HNRNPA3P51991 378 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 TGFBR3Q03167 851 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 KRTCAP3Q53RY4 240 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 Q8IYB0 196 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 LAMTOR2Q9Y2Q5 125 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 TBL2Q9Y4P3 447 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 DOCK11Q5JSL3 2073 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 ZNF253O75346 499 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 PTTG1IPP53801 180 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 RPL30P62888 115 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 C9orf135Q5VTT2 229 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 LEMD1Q68G75 181 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 TIPARPQ7Z3E1 657 aaKnown RBP13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 KLHDC1Q8N7A1 406 aa13.02□□□□□ -0.33
CACNA1A-235ENST00000637004 C15orf62A8K5M9 175 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 SLC17A3O00476 420 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 CDKN1BP46527 198 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 AMTP48728 403 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 HTD2P86397 168 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 PDLIM3Q53GG5 364 aaPredicted RBP13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 OR10J3Q5JRS4 329 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 WDR73Q6P4I2 378 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 Q6ZN92 141 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 MMD2Q8IY49 270 aa13.01□□□□□ -0.33
CACNA1A-235ENST00000637004 STPG4Q8N801 248 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms