RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 SPSB4Q96A44 273 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 BMFQ96LC9 184 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 TAAR6Q96RI8 345 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 FGF22Q9HCT0 170 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 ZNF331Q9NQX6 463 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-213ENST00000636759 FGF21Q9NSA1 209 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 BOKQ9UMX3 212 aaPredicted RBP5.79□□□□□ -1.48
SCN1A-213ENST00000636759 PSG8Q9UQ74 426 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 CD300LBA8K4G0 201 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 H3BMH7 237 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 NEURL1O76050 574 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 APCSP02743 223 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 FAM87AP0C7U9 286 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 MRPS21P82921 87 aaKnown RBP5.79□□□□□ -1.48
SCN1A-213ENST00000636759 SLC38A11Q08AI6 406 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 TBR1Q16650 682 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 ZNF114Q8NC26 417 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 CLDN23Q96B33 292 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 KCNIP2Q9NS61 270 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 FAM206AQ9NX38 181 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 ZNF257Q9Y2Q1 563 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 HEBP2Q9Y5Z4 205 aa5.79□□□□□ -1.48
SCN1A-213ENST00000636759 IGLV3-19P01714 112 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 SLC35E2P0CK97 266 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 PF4V1P10720 104 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 FCGR2AP12318 317 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 NPPCP23582 126 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 IL12BP29460 328 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 PAX9P55771 341 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 FNDC7Q5VTL7 733 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 EBLN2Q6P2I7 272 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 PRSS41Q7RTY9 318 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 C5orf30Q96GV9 206 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 JPT1Q9UK76 154 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 ZNF835Q9Y2P0 537 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 TIMM9Q9Y5J7 89 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 A0A1W2PPV4 95 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 SYNGR2O43760 224 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 GPR75O95800 540 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 NUDT14O95848 222 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 PPYP01298 95 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 IGKV1D-33P01593 117 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 IGKV1-33P01594 117 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 ATP5G3P48201 142 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 SLC35B1P78383 322 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 MYBPHQ13203 477 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 TNXAQ16473 311 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 TMEM92Q6UXU6 159 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 ADAMTSL5Q6ZMM2 481 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 OR5D13Q8NGL4 314 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 ZNF418Q8TF45 676 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-213ENST00000636759 SPATA25Q9BR10 227 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 TXNIPQ9H3M7 391 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 TBC1D29Q9UFV1 150 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 KCNS2Q9ULS6 477 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 IGFBP2P18065 325 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 FAM162BQ5T6X4 162 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 OCC1Q8TAD7 63 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 BAHD1Q8TBE0 780 aaPredicted RBP5.78□□□□□ -1.48
SCN1A-213ENST00000636759 TMEM45BQ96B21 275 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 JMJD8Q96S16 334 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 ANAPC13Q9BS18 74 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 MS4A5Q9H3V2 200 aa5.78□□□□□ -1.48
SCN1A-213ENST00000636759 A0A1W2PPM0 123 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 BMPR1BO00238 502 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 AMY1AP04745 511 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 SSBP2P81877 361 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-213ENST00000636759 PLCXD2Q0VAA5 305 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 KIR3DS1Q14943 382 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 NMSQ5H8A3 153 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 C1QL2Q7Z5L3 287 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 OR4C3Q8NH37 302 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 NANOS1Q8WY41 292 aaKnown RBP5.77□□□□□ -1.49
SCN1A-213ENST00000636759 GALMQ96C23 342 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 MS4A6AQ9H2W1 248 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 SAP30LQ9HAJ7 183 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 YAE1D1Q9NRH1 226 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 IL36GQ9NZH8 169 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 FER1L5A0AVI2 2057 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 PCDH15Q96QU1 1955 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 MYO9BQ13459 2157 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 B5MCH6 92 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 TCL1AP56279 114 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 ACSM6Q6P461 480 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 INO80CQ6PI98 192 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-213ENST00000636759 ASCL4Q6XD76 172 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 OR52E5Q8NH55 327 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 RNF183Q96D59 192 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 TMEM204Q9BSN7 226 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 SPXQ9BT56 116 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 DUSP23Q9BVJ7 150 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 C19orf24Q9BVV8 132 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 PKIBQ9C010 78 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 HSPB8Q9UJY1 196 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 CYSLTR1Q9Y271 337 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 HILPDAQ9Y5L2 63 aa5.77□□□□□ -1.49
SCN1A-213ENST00000636759 TRAV36DV7A0A075B6V5 113 aa5.76□□□□□ -1.49
SCN1A-213ENST00000636759 KBTBD11-OT1A0A1B0GTJ5 212 aa5.76□□□□□ -1.49
SCN1A-213ENST00000636759 TMEM189A5PLL7 270 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms