RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 MMP16P51512 607 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 MGST3O14880 152 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 TIAF1O95411 115 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 TMEM106BQ9NUM4 274 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 ASXL3Q9C0F0 2248 aa15.26■□□□□ 0.03
CACNA1A-227ENST00000636549 SPSB2Q99619 263 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 TNRC6CQ9HCJ0 1690 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 FOXS1O43638 330 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 TYMSP04818 313 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 SOD3P08294 240 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 TMEM174Q8WUU8 243 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 ZNF430Q9H8G1 570 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 APOBEC3AP31941 199 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 ERGP11308 486 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 MC5RP33032 325 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 RAB9AP51151 201 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 CYB561D1Q8N8Q1 229 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 H0YL77 283 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 C10orf126Q8N4M7 172 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 CHRNA10Q9GZZ6 450 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 MRPS16Q9Y3D3 137 aaKnown RBP15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 CNTFRP26992 372 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 PPP1R32Q7Z5V6 425 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 C3orf56Q8N813 242 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 OR5AC2Q9NZP5 309 aa15.25■□□□□ 0.03
CACNA1A-227ENST00000636549 RRHO14718 337 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 PHLDA1Q8WV24 401 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 SLC17A5Q9NRA2 495 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 ZNF585BQ52M93 769 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 C1QL1O75973 258 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 LEMD1Q68G75 181 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 RHOVQ96L33 236 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 SH3BGRL3Q9H299 93 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 RPS11P62280 158 aaKnown RBP eCLIP15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 APOMO95445 188 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 SSC4DQ8WTU2 575 aa15.24■□□□□ 0.03
CACNA1A-227ENST00000636549 FBLN7Q53RD9 439 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 MRPL18Q9H0U6 180 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 MYO5AQ9Y4I1 1855 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 BRWD1Q9NSI6 2320 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 SYNGR3O43761 229 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 TMEM136Q6ZRR5 245 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 TXNDC17Q9BRA2 123 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 CHST5Q9GZS9 411 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 TRAV40A0A0B4J280 105 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 ODAMA1E959 279 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 MYO16Q9Y6X6 1858 aa15.23■□□□□ 0.03
CACNA1A-227ENST00000636549 MMD2Q8IY49 270 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 MRPL16Q9NX20 251 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 A0A1W2PPV9 198 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 FABP2P12104 132 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 WDR54Q9H977 334 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 ELOA3CA0A087WX78 387 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 A0A1W2PQD3 144 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 GCSAMQ8N6F7 178 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 A8MWL6 223 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 CLPSP04118 112 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 EVI2AP22794 236 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 UQCC3Q6UW78 93 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 ZNF385CQ66K41 422 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 TGIF2-C20orf24A0A0A6YYL0 155 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 CTXND1A0A1B0GTU2 59 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 CFDP00746 253 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 GNLYP22749 145 aa15.22■□□□□ 0.03
CACNA1A-227ENST00000636549 TJP1Q07157 1748 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 VENTXO95231 258 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 ASIPP42127 132 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 FOXA3P55318 350 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 DNAJC4Q9NNZ3 241 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 MCM3APO60318 1980 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 FAM216BQ8N7L0 139 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 A0A0G2JMM0 328 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 A0A1W2PPB8 328 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 A0A1W2PRS3 328 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 KIR3DP1A8MWS1 328 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 CELA3BP08861 270 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 RFPL3SP0C7P2 107 aa15.21■□□□□ 0.03
CACNA1A-227ENST00000636549 CGB7P0DN87 165 aa15.21■□□□□ 0.02
CACNA1A-227ENST00000636549 COX6A1P12074 109 aa15.21■□□□□ 0.02
CACNA1A-227ENST00000636549 CRIM1Q9NZV1 1036 aa15.21■□□□□ 0.02
CACNA1A-227ENST00000636549 PITX3O75364 302 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 PGLYRP1O75594 196 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 DEGS2Q6QHC5 323 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 LINC00596Q86U02 117 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 FGFRL1Q8N441 504 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 OR5A1Q8NGJ0 315 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 PEMTQ9UBM1 199 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 OR11H7Q8NGC8 314 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 GATA2P23769 480 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 SRIP30626 198 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 HBBP68871 147 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 APCDD1LQ8NCL9 501 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 PTPRZ1P23471 2315 aaPredicted RBP15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 HOXC8P31273 242 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 BHLHA9Q7RTU4 235 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 DLL3Q9NYJ7 618 aa15.2■□□□□ 0.02
CACNA1A-227ENST00000636549 FGF12P61328 243 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 SRSF4Q08170 494 aaKnown RBP15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 MSRB3Q8IXL7 192 aa15.19■□□□□ 0.02
CACNA1A-227ENST00000636549 DDA1Q9BW61 102 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms