RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 PRB2P02812 416 aaPredicted RBP12.22□□□□□ -0.45
LINC00339-207ENST00000634712 KIR2DS2P43631 304 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 TNXAQ16473 311 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 C19orf54Q5BKX5 351 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 FOXB2Q5VYV0 432 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 IDO2Q6ZQW0 420 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 TMEM17Q86X19 198 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 OR1N2Q8NGR9 330 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 MYOZ3Q8TDC0 251 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 CASTOR1Q8WTX7 329 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 TMEM68Q96MH6 324 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 GNB4Q9HAV0 340 aa12.22□□□□□ -0.45
LINC00339-207ENST00000634712 SOX15O60248 233 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 NOL3O60936 208 aaKnown RBP12.21□□□□□ -0.45
LINC00339-207ENST00000634712 NAT1P18440 290 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 HLA-DMAP28067 261 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 TPPP2P59282 170 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 TSPAN5P62079 268 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 CATR1Q13166 79 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 DYRK1AQ13627 763 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 KIAA0141Q14154 515 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-207ENST00000634712 PRSS8Q16651 343 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 DHRS11Q6UWP2 260 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 OR5T1Q8NG75 326 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 OR6F1Q8NGZ6 308 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 VSTM2AQ8TAG5 236 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 GPX8Q8TED1 209 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 RAB2BQ8WUD1 216 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 AIFM2Q9BRQ8 373 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 ZNF2Q9BSG1 426 aaPredicted RBP12.21□□□□□ -0.45
LINC00339-207ENST00000634712 SLA2Q9H6Q3 261 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 ANAPC10Q9UM13 185 aa12.21□□□□□ -0.45
LINC00339-207ENST00000634712 MSGN1A6NI15 193 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 SULT1C2O00338 296 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 MPPED1O15442 326 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 HRASP01112 189 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 TRGV3P03979 118 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 OR8U8P0C7N1 319 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 SAA1P0DJI8 122 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-207ENST00000634712 RPL5P46777 297 aaKnown RBP12.2□□□□□ -0.46
LINC00339-207ENST00000634712 RUNX1Q01196 453 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 EIF4EBP1Q13541 118 aaPredicted RBP12.2□□□□□ -0.46
LINC00339-207ENST00000634712 MMD2Q8IY49 270 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 GPHA2Q96T91 129 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 EXTL2Q9UBQ6 330 aa12.2□□□□□ -0.46
LINC00339-207ENST00000634712 I3L521 148 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 RGS5O15539 181 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 OR2A4O95047 310 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 RCVRNP35243 200 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 HRH1P35367 487 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 TMBIM6P55061 237 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 ZNF818PQ6ZRF7 136 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 LYSMD2Q8IV50 215 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 SPAG16Q8N0X2 631 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 POC5Q8NA72 575 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 OR2A7Q96R45 310 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 ZNF430Q9H8G1 570 aaPredicted RBP12.19□□□□□ -0.46
LINC00339-207ENST00000634712 ADAM30Q9UKF2 790 aa12.19□□□□□ -0.46
LINC00339-207ENST00000634712 C13orf42A0A1B0GVH6 325 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 H3BUA1 57 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 SSBP2P81877 361 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 SPCS2Q15005 226 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 AADACL3Q5VUY0 350 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 CMTM1Q8IZ96 169 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 VKORC1L1Q8N0U8 176 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 OR51H1Q8NH63 302 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 SRSF12Q8WXF0 261 aaKnown RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 MOB3AQ96BX8 217 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 BCL7BQ9BQE9 202 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 COA4Q9NYJ1 87 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 ZMAT5Q9UDW3 170 aaKnown RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 A0A0G2JLM5 398 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 IGHV3-11P01762 117 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 LGALS1P09382 135 aaKnown RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 APELAP0DMC3 54 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 S100GP29377 79 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 GNRHRP30968 328 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 HOXD3P31249 432 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 FHL3Q13643 280 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 RNASE12Q5GAN4 147 aaKnown RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 LPCAT3Q6P1A2 487 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 SSX9Q7RTT3 188 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 MRAPQ8TCY5 172 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 CD300LFQ8TDQ1 290 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 RHOVQ96L33 236 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 SPIN2AQ99865 258 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 SPIN2BQ9BPZ2 258 aa12.18□□□□□ -0.46
LINC00339-207ENST00000634712 ALX4Q9H161 411 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 AURKAIP1Q9NWT8 199 aaPredicted RBP12.18□□□□□ -0.46
LINC00339-207ENST00000634712 LINC01619G3V211 115 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 RBFOX2O43251 390 aaKnown RBP eCLIP12.17□□□□□ -0.46
LINC00339-207ENST00000634712 TPPPO94811 219 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 KBTBD11O94819 623 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 HPRT1P00492 218 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 IFNA6P05013 189 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 BRWD1-AS2P59051 145 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
LINC00339-207ENST00000634712 C9orf66Q5T8R8 295 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms