RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 ZNF561Q8N587 486 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 RPP25LQ8N5L8 163 aaKnown RBP3.6□□□□□ -1.83
CHD2-220ENST00000630813 CLRN3Q8NCR9 226 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 CLDND2Q8NHS1 167 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 LINC01560Q8TB33 94 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 MBD3L1Q8WWY6 194 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 R3HDM4Q96D70 268 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 RCC1LQ96I51 464 aaKnown RBP3.6□□□□□ -1.83
CHD2-220ENST00000630813 WDR61Q9GZS3 305 aaKnown RBP3.6□□□□□ -1.83
CHD2-220ENST00000630813 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.6□□□□□ -1.83
CHD2-220ENST00000630813 OR6C3Q9NZP0 311 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 JPT1Q9UK76 154 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 RBM7Q9Y580 266 aaKnown RBP3.6□□□□□ -1.83
CHD2-220ENST00000630813 ROS1P08922 2347 aa3.6□□□□□ -1.83
CHD2-220ENST00000630813 POLEQ07864 2286 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 SAA2-SAA4A0A096LPE2 208 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 LOC102723971A0A1B0GUV8 181 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RBFOX3A6NFN3 312 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RNF212BA8MTL3 300 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 UMAD1C9J7I0 102 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 LYNX1G3V0Z9 82 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RRHO14718 337 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RBFOX2O43251 390 aaKnown RBP eCLIP3.59□□□□□ -1.83
CHD2-220ENST00000630813 SPINT2O43291 252 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 FCGR3BO75015 233 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 PRH1P02810 166 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 OR8U8P0C7N1 319 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 SAA2P0DJI9 122 aaPredicted RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 CT45A6P0DMU7 189 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 CT45A5P0DMU8 189 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 CT45A7P0DMV0 189 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 LYNX1P0DP58 116 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 DEFA4P12838 97 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 S100GP29377 79 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 CA7P43166 264 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 GPR12P47775 334 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 PPT1P50897 306 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 DLX1P56177 255 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 OR2B8PP59922 312 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 KRTAP10-2P60368 255 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RAB2AP61019 212 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 SLC38A11Q08AI6 406 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 ZNF616Q08AN1 781 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 DIAPH2-AS1Q14236 149 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 HNF4GQ14541 408 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 ZNF266Q14584 549 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 POU2AF1Q16633 256 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 MRGPRG-AS1Q2M3A8 158 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 FAM90A2PQ658T7 463 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 TMEM200BQ69YZ2 307 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 TRAT1Q6PIZ9 186 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 TMEM108Q6UXF1 575 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 SVBPQ8N300 66 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 COMMD1Q8N668 190 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RNASE11Q8TAA1 199 aaKnown RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 CA5BP1Q8WTZ4 195 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 C17orf50Q8WW18 174 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.83
CHD2-220ENST00000630813 RNASE6Q93091 150 aaKnown RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 CLCC1Q96S66 551 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 HSD17B10Q99714 261 aaKnown RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 VKORC1Q9BQB6 163 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 PSMG3Q9BT73 122 aaPredicted RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 PARD6GQ9BYG4 376 aaPredicted RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 EGLN1Q9GZT9 426 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 FAM234AQ9H0X4 552 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 ZNF665Q9H7R5 613 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 IDI2-AS1Q9NZ38 188 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 GNG12Q9UBI6 72 aa3.59□□□□□ -1.83
CHD2-220ENST00000630813 RPUSD1Q9UJJ7 312 aaKnown RBP3.59□□□□□ -1.83
CHD2-220ENST00000630813 YLPM1P49750 1951 aaKnown RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 TLN1Q9Y490 2541 aaKnown RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 UBE2L5PA0A1B0GUS4 154 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 A0A1W2PPR1 153 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 C7orf77A4D0Y5 90 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 CGB1A6NKQ9 187 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 ZNF729A6NN14 1252 aaPredicted RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 MARCH11A6NNE9 402 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 ZNF727A8MUV8 499 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 E7EUB6 86 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 EIF4EBP3O60516 100 aaPredicted RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 DFFBO76075 338 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 YIF1AO95070 293 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 SCAF4O95104 1147 aaKnown RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 HPRT1P00492 218 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 IGKV1-16P04430 117 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 CRYBA1P05813 215 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 OR13C7P0DN81 318 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 ATF4P18848 351 aaPredicted RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 NPPCP23582 126 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 GNG10P50151 68 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 FGF8P55075 233 aaPredicted RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 LINC00310P59036 64 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 RPS23P62266 143 aaKnown RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 GNB2P62879 340 aa3.58□□□□□ -1.84
CHD2-220ENST00000630813 MRPS11P82912 194 aaKnown RBP3.58□□□□□ -1.84
CHD2-220ENST00000630813 PRB3Q04118 309 aaPredicted RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms