RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 CLCC1Q96S66 551 aa8.63□□□□□ -1.03
DDX41-219ENST00000629036 ZNF2Q9BSG1 426 aaPredicted RBP8.63□□□□□ -1.03
DDX41-219ENST00000629036 GON7Q9BXV9 100 aa8.63□□□□□ -1.03
DDX41-219ENST00000629036 SLC5A7Q9GZV3 580 aa8.63□□□□□ -1.03
DDX41-219ENST00000629036 ZNF430Q9H8G1 570 aaPredicted RBP8.63□□□□□ -1.03
DDX41-219ENST00000629036 GNB4Q9HAV0 340 aa8.63□□□□□ -1.03
DDX41-219ENST00000629036 SCOCQ9UIL1 159 aa8.63□□□□□ -1.03
DDX41-219ENST00000629036 FAM25AB3EWG3 89 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 FAM25CB3EWG5 89 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 FAM25GB3EWG6 89 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 I3L521 148 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 RBFOX2O43251 390 aaKnown RBP eCLIP8.62□□□□□ -1.036e-7■■■■□ 21.9
DDX41-219ENST00000629036 RBMXL2O75526 392 aaKnown RBP8.62□□□□□ -1.03
DDX41-219ENST00000629036 CD74P04233 296 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 SLC6A1P30531 599 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 RUNX1Q01196 453 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 POU2AF1Q16633 256 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 AKIRIN2Q53H80 203 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 RNASE12Q5GAN4 147 aaKnown RBP8.62□□□□□ -1.03
DDX41-219ENST00000629036 CXorf66Q5JRM2 361 aaPredicted RBP8.62□□□□□ -1.03
DDX41-219ENST00000629036 C10orf55Q5SWW7 151 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 TMEM17Q86X19 198 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 ZNF695Q8IW36 515 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 MRPL41Q8IXM3 137 aaKnown RBP8.62□□□□□ -1.03
DDX41-219ENST00000629036 VKORC1L1Q8N0U8 176 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 ZBTB34Q8NCN2 500 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 KLHL30-AS1Q8NEE0 82 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 LFNGQ8NES3 379 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 OR4D10Q8NGI6 311 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 CASTOR1Q8WTX7 329 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 SMIM4Q8WVI0 70 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 C4orf3Q8WVX3 66 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 TCTEX1D2Q8WW35 142 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 DUX3Q96PT4 197 aa8.62□□□□□ -1.03
DDX41-219ENST00000629036 TINAGL1Q9GZM7 467 aaPredicted RBP8.62□□□□□ -1.03
DDX41-219ENST00000629036 FOXA2Q9Y261 457 aaPredicted RBP8.62□□□□□ -1.03
DDX41-219ENST00000629036 SMIM31A0A1B0GVY4 71 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 E7EUB6 86 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 GABARAPH6UMI1 98 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 M0QYG6 137 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 ZNF701M0R085 212 aaPredicted RBP8.61□□□□□ -1.03
DDX41-219ENST00000629036 BRI3O95415 125 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 ZNF735P0CB33 412 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 PF4V1P10720 104 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 GNB1P62873 340 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 FXYD3Q14802 87 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 PLGLAQ15195 96 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 ZNF585BQ52M93 769 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 OXLD1Q5BKU9 147 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 KHDC1LQ5JSQ8 128 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 FOXB2Q5VYV0 432 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 TCTEX1D1Q8N7M0 179 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 OR4S2Q8NH73 311 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 GRPEL2Q8TAA5 225 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 TMEM167AQ8TBQ9 72 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 RSRP1Q9BUV0 290 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 PRELID3BQ9Y3B1 194 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 SORL1Q92673 2214 aa8.61□□□□□ -1.03
DDX41-219ENST00000629036 A0A1W2PN81 502 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 TEX22C9J3V5 150 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 CTDSPLO15194 276 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 PGLYRP1O75594 196 aaPredicted RBP8.6□□□□□ -1.03
DDX41-219ENST00000629036 KBTBD11O94819 623 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 CD3DP04234 171 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 TNFSF8P32971 234 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 CHRNA7P36544 502 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 RAB9AP51151 201 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 UCP3P55916 312 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 HERV-K104P61576 105 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 VMA21Q3ZAQ7 101 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 ACTBL2Q562R1 376 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 RHOVQ96L33 236 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 UBE2E2Q96LR5 201 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 V9GYH0 126 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 DNAH9Q9NYC9 4486 aa8.6□□□□□ -1.03
DDX41-219ENST00000629036 TRAV3A0A0B4J244 114 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 RGS5O15539 181 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 GSTZ1O43708 216 aaPredicted RBP8.59□□□□□ -1.03
DDX41-219ENST00000629036 S1PR2O95136 353 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 RLN1P04808 185 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 MYOD1P15172 320 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 IGLL1P15814 213 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 TBPP20226 339 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 MYCNOSP40205 109 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 KIR2DS2P43631 304 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
DDX41-219ENST00000629036 CBX3Q13185 183 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 ZNF79Q15937 498 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 PYHIN1Q6K0P9 492 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 UNQ5815/PRO19632Q6UWF5 114 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 SPAG16Q8N0X2 631 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 TMEM229BQ8NBD8 167 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 ADAD2Q8NCV1 583 aaKnown RBP8.59□□□□□ -1.03
DDX41-219ENST00000629036 OR5M8Q8NGP6 311 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 OR6F1Q8NGZ6 308 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 OR51H1Q8NH63 302 aa8.59□□□□□ -1.03
DDX41-219ENST00000629036 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
DDX41-219ENST00000629036 TRIM63Q969Q1 353 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms