RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ZNF486Q96H40 463 aaPredicted RBP15.98■□□□□ 0.15
PTCD3-220ENST00000627371 CLCC1Q96S66 551 aa15.98■□□□□ 0.15
PTCD3-220ENST00000627371 GON7Q9BXV9 100 aa15.98■□□□□ 0.15
PTCD3-220ENST00000627371 PARP11Q9NR21 331 aa15.98■□□□□ 0.15
PTCD3-220ENST00000627371 SLC2A8Q9NY64 477 aa15.98■□□□□ 0.15
PTCD3-220ENST00000627371 ECI1P42126 302 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 AP3S2P59780 193 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 SLC35B1P78383 322 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 ZNF562Q6V9R5 426 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 ZNF329Q86UD4 541 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 TOMM5Q8N4H5 51 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 GDPD1Q8N9F7 314 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 OR4X2Q8NGF9 303 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 MRGPRFQ96AM1 343 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 PRRT1Q99946 306 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 SLC2A9Q9NRM0 540 aa15.97■□□□□ 0.15
PTCD3-220ENST00000627371 HPRT1P00492 218 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 HRASP01112 189 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 VDAC1P21796 283 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 F2RP25116 425 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 FAUP35544 74 aaKnown RBP15.96■□□□□ 0.15
PTCD3-220ENST00000627371 CRIP2P52943 208 aaPredicted RBP15.96■□□□□ 0.15
PTCD3-220ENST00000627371 RND3P61587 244 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 ZNF45Q02386 682 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 CFHR3Q02985 330 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 LINC00299Q6ZSB3 139 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 TBC1D26Q86UD7 250 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 TCTEX1D1Q8N7M0 179 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 OR51S1Q8NGJ8 323 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 DEDD2Q8WXF8 326 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 FBXO7Q9Y3I1 522 aa15.96■□□□□ 0.15
PTCD3-220ENST00000627371 TAS2R31P59538 309 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 CD83Q01151 205 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 PJVKQ0ZLH3 352 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 SURF2Q15527 256 aaPredicted RBP15.95■□□□□ 0.14
PTCD3-220ENST00000627371 MRGPRG-AS1Q2M3A8 158 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 TCTEX1D4Q5JR98 221 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 HIST2H2BDQ6DRA6 164 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 IDO2Q6ZQW0 420 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 VKORC1L1Q8N0U8 176 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 COMMD1Q8N668 190 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 OR13C8Q8NGS7 320 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 VSTM2AQ8TAG5 236 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 ZFAND1Q8TCF1 268 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 MARCH1Q8TCQ1 289 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 SDHCQ99643 169 aaPredicted RBP15.95■□□□□ 0.14
PTCD3-220ENST00000627371 CITED2Q99967 270 aaPredicted RBP15.95■□□□□ 0.14
PTCD3-220ENST00000627371 AIFM2Q9BRQ8 373 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 PLEKHA2Q9HB19 425 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 MCUBQ9NWR8 336 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 PTTG2Q9NZH5 202 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 SCP2D1Q9UJQ7 156 aa15.95■□□□□ 0.14
PTCD3-220ENST00000627371 ARPC1BO15143 372 aaKnown RBP15.94■□□□□ 0.14
PTCD3-220ENST00000627371 CREBL2O60519 120 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-220ENST00000627371 PI3P19957 117 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 PIGPP57054 158 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 SSBP2P81877 361 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-220ENST00000627371 PRSS8Q16651 343 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 PUSL1Q8N0Z8 303 aaKnown RBP15.94■□□□□ 0.14
PTCD3-220ENST00000627371 SGMS2Q8NHU3 365 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 ABHD5Q8WTS1 349 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 ARPC1AQ92747 370 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 RHOVQ96L33 236 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 HRASLSQ9HDD0 168 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 FAM212BQ9NTI7 297 aaPredicted RBP15.94■□□□□ 0.14
PTCD3-220ENST00000627371 COMMD9Q9P000 198 aa15.94■□□□□ 0.14
PTCD3-220ENST00000627371 TRAV41A0A0B4J266 112 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 G3V318 75 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 MPPED1O15442 326 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 KBTBD11O94819 623 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 OR2A4O95047 310 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 S1PR2O95136 353 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 CTSDP07339 412 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-220ENST00000627371 EGR2P11161 476 aaPredicted RBP15.93■□□□□ 0.14
PTCD3-220ENST00000627371 NQO2P16083 231 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 GNB1P62873 340 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 FXYD3Q14802 87 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 BAK1Q16611 211 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 POU2AF1Q16633 256 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 TEX38Q6PEX7 206 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 NDUFA11Q86Y39 141 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 OR2A7Q96R45 310 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 FAM103A1Q9BTL3 118 aaKnown RBP15.93■□□□□ 0.14
PTCD3-220ENST00000627371 AKIP1Q9NQ31 210 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 WSB1Q9Y6I7 421 aa15.93■□□□□ 0.14
PTCD3-220ENST00000627371 WNK1Q9H4A3 2382 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 M0QZ24 198 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 CNIH1O95406 144 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 IGHG4P01861 327 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 OPN1MWP04001 364 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 OPN1MW2P0DN77 364 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 OPN1MW3P0DN78 364 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 PPIFP30405 207 aaKnown RBP15.92■□□□□ 0.14
PTCD3-220ENST00000627371 ECSCRQ19T08 205 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 C2orf68Q2NKX9 166 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 ZNF585BQ52M93 769 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 C19orf54Q5BKX5 351 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 TRIQKQ629K1 86 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 SSX9Q7RTT3 188 aa15.92■□□□□ 0.14
PTCD3-220ENST00000627371 MMD2Q8IY49 270 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms