RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 PARD6AQ9NPB6 346 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 TRAV41A0A0B4J266 112 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 C11orf94C9JXX5 98 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 HOXA3O43365 443 aaPredicted RBP9.4□□□□□ -0.9
VPS8-227ENST00000625842 ZIC3O60481 467 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 PTBP3O95758 552 aaKnown RBP9.4□□□□□ -0.9
VPS8-227ENST00000625842 SUMO2P61956 95 aaKnown RBP9.4□□□□□ -0.9
VPS8-227ENST00000625842 C2orf68Q2NKX9 166 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 ABLIM2Q6H8Q1 611 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 OR10AC1Q8NH08 325 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 AQP3Q92482 292 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 NINQ8N4C6 2090 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 VSIG8P0DPA2 414 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 SUCLG1P53597 346 aaKnown RBP9.4□□□□□ -0.9
VPS8-227ENST00000625842 ZNF154Q13106 437 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 LINC00303Q3SY05 128 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 MEIG1Q5JSS6 88 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 C11orf44Q8N8P7 122 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 NECAP1Q8NC96 275 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 GATAD1Q8WUU5 269 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
VPS8-227ENST00000625842 COL6A6A6NMZ7 2263 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 MYH15Q9Y2K3 1946 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 A0A1B0GTL3 188 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 OR11H12B2RN74 326 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 CLDN34H7C241 214 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 GPR183P32249 361 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 GLIPR1P48060 266 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 DPPA3Q6W0C5 159 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 NCCRP1Q6ZVX7 275 aaPredicted RBP9.4□□□□□ -0.91
VPS8-227ENST00000625842 RAB24Q969Q5 203 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 SLC25A38Q96DW6 304 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 GSX2Q9BZM3 304 aa9.4□□□□□ -0.91
VPS8-227ENST00000625842 H3BRM9 83 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 FCN1O00602 326 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 OR9G9P0C7N8 305 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 TRAV14DV4A0A0A6YYC5 116 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 TMEM238LA0A1B0GVL6 79 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 A6NJY4 79 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 IGHV3-11P01762 117 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 TDGF1P13385 188 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 PRSS53Q2L4Q9 553 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 DHRS11Q6UWP2 260 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 FAM216BQ8N7L0 139 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 ZNRF1Q8ND25 227 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 GATA6Q92908 595 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 HSPB8Q9UJY1 196 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 AMBPP02760 352 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 PPP1R1AQ13522 171 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 MOGAT2Q3SYC2 334 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 ADAT3Q96EY9 351 aaPredicted RBP9.39□□□□□ -0.91
VPS8-227ENST00000625842 TAF1P21675 1872 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 ZNF660Q6AZW8 331 aaPredicted RBP9.39□□□□□ -0.91
VPS8-227ENST00000625842 SIGIRRQ6IA17 410 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 KLHL30-AS1Q8NEE0 82 aa9.39□□□□□ -0.91
VPS8-227ENST00000625842 NCOR1O75376 2440 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 CDK5RAP2Q96SN8 1893 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 HKR1P10072 659 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 GUK1Q16774 197 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 SPSB3Q6PJ21 355 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 FAM103A1Q9BTL3 118 aaKnown RBP9.38□□□□□ -0.91
VPS8-227ENST00000625842 C7orf66A4D0T2 115 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 C8orf88P0DMB2 117 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 NCMAPQ5T1S8 102 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 TCF24Q7RTU0 167 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 OR5AU1Q8NGC0 362 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 RGP1Q92546 391 aaPredicted RBP9.38□□□□□ -0.91
VPS8-227ENST00000625842 IGKV3OR2-268A0A0C4DH90 116 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 IGHG3P01860 377 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 M6PRP20645 277 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 DYNLT3P51808 116 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 TMEM50BP56557 158 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 SRSF4Q08170 494 aaKnown RBP9.38□□□□□ -0.91
VPS8-227ENST00000625842 PSG7Q13046 419 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 TMEM255AQ5JRV8 349 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 PLA2G2CQ5R387 149 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 LPAR5Q9H1C0 372 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 SRD5A3Q9H8P0 318 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 NAT8Q9UHE5 227 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 TCF19Q9Y242 345 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 CACNA1HO95180 2353 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 STRCP1A6NGW2 1772 aa9.38□□□□□ -0.91
VPS8-227ENST00000625842 TMSB15BA0A087X1C1 80 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 MARCH11A6NNE9 402 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 NPIPB9F8W1W9 429 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 H3BUX3 64 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 CTDSPLO15194 276 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 NPIPB7O75200 414 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 SRSF10O75494 262 aaKnown RBP9.37□□□□□ -0.91
VPS8-227ENST00000625842 TGFBR1P36897 503 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 RAB32Q13637 225 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 ELOBQ15370 118 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 NUDT11Q96G61 164 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 WDFY2Q96P53 400 aa9.37□□□□□ -0.91
VPS8-227ENST00000625842 IGLV3-32A0A0A0MS00 114 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms