RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR4A4PQ8NGN8 299 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 OR1L6Q8NGR2 347 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 OR10J5Q8NHC4 309 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 CYGBQ8WWM9 190 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 DCUN1D5Q9BTE7 237 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 PECRQ9BY49 303 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 UBQLN2Q9UHD9 624 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 TP53TG1Q9Y2A0 90 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 VPS13DQ5THJ4 4388 aa10.93□□□□□ -0.66
PNKP-218ENST00000625299 DPPA5A6NC42 116 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 CD1AP06126 327 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 SAA1P0DJI8 122 aaPredicted RBP10.92□□□□□ -0.66
PNKP-218ENST00000625299 MAP2K4P45985 399 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 TPBGQ13641 420 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 CDK10Q15131 360 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 FAM106AQ4KMX7 169 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 HSD17B12Q53GQ0 312 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 SLC25A42Q86VD7 318 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 PHYHIPQ92561 330 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 CCDC140Q96MF4 163 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 PLGRKTQ9HBL7 147 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 HSF4Q9ULV5 492 aa10.92□□□□□ -0.66
PNKP-218ENST00000625299 LINC00473A8K010 186 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 FOXI3A8MTJ6 420 aaPredicted RBP10.91□□□□□ -0.66
PNKP-218ENST00000625299 GSTT2P0CG29 244 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 GSTT2BP0CG30 244 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 DUTP33316 252 aaKnown RBP10.91□□□□□ -0.66
PNKP-218ENST00000625299 TMEM50BP56557 158 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 AHSA2Q719I0 299 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 MMD2Q8IY49 270 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 OSR1Q8TAX0 266 aaPredicted RBP10.91□□□□□ -0.66
PNKP-218ENST00000625299 FBLIM1Q8WUP2 373 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 MAFIPQ8WZ33 124 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 ADTRPQ96IZ2 230 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 FYTTD1Q96QD9 318 aaKnown RBP10.91□□□□□ -0.66
PNKP-218ENST00000625299 GINS4Q9BRT9 223 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 ZNF257Q9Y2Q1 563 aa10.91□□□□□ -0.66
PNKP-218ENST00000625299 A8MWP6 167 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 J3QRK9 145 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 RPL35AP18077 110 aaKnown RBP10.9□□□□□ -0.66
PNKP-218ENST00000625299 ZNF585BQ52M93 769 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 OR2B11Q5JQS5 317 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 PLAC9Q5JTB6 97 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 OR4A47Q6IF82 309 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 SLC38A6Q8IZM9 456 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 PQLC1Q8N2U9 271 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 FAM89BQ8N5H3 189 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 OR2C3Q8N628 320 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 STPG3Q8N7X2 389 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 CABLES2Q9BTV7 478 aa10.9□□□□□ -0.66
PNKP-218ENST00000625299 TRBV6-7A0A0A0MS04 114 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 UBE2CO00762 179 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 FCGR3BO75015 233 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 ATF4P18848 351 aaPredicted RBP10.89□□□□□ -0.67
PNKP-218ENST00000625299 PRR20EP86478 221 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 PRR20CP86479 221 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 PRR20DP86480 221 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 PRR20BP86481 221 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 PRR20AP86496 221 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 UNQ9165/PRO28630Q6UXU0 137 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 VKORC1L1Q8N0U8 176 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 MS4A15Q8N5U1 240 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 SETD9Q8NE22 299 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 RNF183Q96D59 192 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 S100A14Q9HCY8 104 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 FBXL17Q9UF56 701 aa10.89□□□□□ -0.67
PNKP-218ENST00000625299 TRAV25A0A0B4J276 109 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 IGHV3-35A0A0C4DH35 117 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 TEX22C9J3V5 150 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 FCGR3AP08637 254 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 RPL27AP46776 148 aaKnown RBP10.88□□□□□ -0.67
PNKP-218ENST00000625299 CLDN12P56749 244 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 RAB11BQ15907 218 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 NANOGP1Q8N7R0 232 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 OR56B1Q8NGI3 324 aa10.88□□□□□ -0.67
PNKP-218ENST00000625299 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 A0A075B6Q4 140 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 NPIPB5A8MRT5 1133 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 SLC17A2O00624 439 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 REG1AP05451 166 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 AREGP15514 252 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 CTRB1P17538 263 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 FCGR2BP31994 310 aaPredicted RBP10.87□□□□□ -0.67
PNKP-218ENST00000625299 NANOS2P60321 138 aaKnown RBP10.87□□□□□ -0.67
PNKP-218ENST00000625299 MED22Q15528 200 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 KCTD9Q7L273 389 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 C10orf67Q8IYJ2 551 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 MARC2Q969Z3 335 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 GFI1Q99684 422 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
PNKP-218ENST00000625299 OR51E2Q9H255 320 aa10.87□□□□□ -0.67
PNKP-218ENST00000625299 AK6Q9Y3D8 172 aaKnown RBP10.87□□□□□ -0.67
PNKP-218ENST00000625299 MFSD2BA6NFX1 497 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 E7EUB6 86 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 RAB27BO00194 218 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 DHFRP00374 187 aa10.86□□□□□ -0.67
PNKP-218ENST00000625299 CLEC3BP05452 202 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms