RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 C1orf174Q8IYL3 243 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 ZNF514Q96K75 400 aaPredicted RBP1.42□□□□□ -2.18
CDKL5-207ENST00000624700 MS4A6AQ9H2W1 248 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 C8orf4Q9NR00 106 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 TAAR3PQ9P1P4 343 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 MUC2Q02817 5179 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 NUMA1Q14980 2115 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 NBEAL2Q6ZNJ1 2754 aa1.42□□□□□ -2.18
CDKL5-207ENST00000624700 MYH11P35749 1972 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 ZNF292O60281 2723 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 A0A087WUU8 490 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 BIRC5O15392 142 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 ATP8B1O43520 1251 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 SSNA1O43805 119 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 KALRNO60229 2985 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 BPGMP07738 259 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 IFNGR2P38484 337 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 CXCR4P61073 352 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 AKR1C1Q04828 323 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 LGALS9BQ3B8N2 356 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 OR10K2Q6IF99 312 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 DAND5Q8N907 189 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 OR8B12Q8NGG6 310 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 OR13C8Q8NGS7 320 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 NAA38Q9BRA0 125 aaKnown RBP1.41□□□□□ -2.18
CDKL5-207ENST00000624700 HDHD2Q9H0R4 259 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 EURLQ9NYK6 297 aa1.41□□□□□ -2.18
CDKL5-207ENST00000624700 POLR3HQ9Y535 204 aaPredicted RBP1.41□□□□□ -2.18
CDKL5-207ENST00000624700 EIF4G1Q04637 1599 aaKnown RBP1.41□□□□□ -2.18
CDKL5-207ENST00000624700 PIK3R4Q99570 1358 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 TMSB15BA0A087X1C1 80 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 LINC00854A0A1B0GVQ3 168 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 FABP12A6NFH5 140 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 KLRC4O43908 158 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 HLA-DQB2P05538 268 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 CXCL2P19875 107 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 CXCL3P19876 107 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 CD40LGP29965 261 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 CLDN12P56749 244 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 FXYD7P58549 80 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 MIAQ16674 131 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 PDPK2PQ6A1A2 396 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 LYZL1Q6UWQ5 148 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 SPATA12Q7Z6I5 190 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 SLC7A6Q92536 515 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 ZNF625Q96I27 306 aaPredicted RBP1.4□□□□□ -2.19
CDKL5-207ENST00000624700 KCTD7Q96MP8 289 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 DOHHQ9BU89 302 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 ZNHIT6Q9NWK9 470 aaKnown RBP1.4□□□□□ -2.19
CDKL5-207ENST00000624700 RGS12O14924 1447 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 CELSR3Q9NYQ7 3312 aa1.4□□□□□ -2.19
CDKL5-207ENST00000624700 CPAMD8Q8IZJ3 1885 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 NCOR2Q9Y618 2525 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 A0A0A6YYH2 397 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 TINCRA0A1B0GVN0 87 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 A6NJ64 397 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 C9JCJ5 164 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 ITGB1BP1O14713 200 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 APOEP02649 317 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 MAP3K7CLP57077 242 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 SKP1P63208 163 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 C5orf46Q6UWT4 87 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 SLC51BQ86UW2 128 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 COA5Q86WW8 74 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 RIBC1Q8N443 379 aaPredicted RBP1.39□□□□□ -2.19
CDKL5-207ENST00000624700 TMEM251Q8N6I4 163 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 UBL4BQ8N7F7 174 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 ZNF675Q8TD23 568 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 TMA16Q96EY4 203 aaKnown RBP1.39□□□□□ -2.19
CDKL5-207ENST00000624700 CCL13Q99616 98 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 TMEM109Q9BVC6 243 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 SPZ1Q9BXG8 430 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 XAGE1AQ9HD64 81 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 IMP3Q9NV31 184 aaKnown RBP1.39□□□□□ -2.19
CDKL5-207ENST00000624700 MALRD1Q5VYJ5 2156 aa1.39□□□□□ -2.19
CDKL5-207ENST00000624700 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
CDKL5-207ENST00000624700 SPTBN4Q9H254 2564 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 A0A1B0GVG6 124 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 RFPL4AA6NLU0 287 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 RFPL4AL1F8VTS6 287 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 APOMO95445 188 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 NAPSAO96009 420 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 UGT2B7P16662 529 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 CA5AP35218 305 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 MAGEA12P43365 314 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 CDK9P50750 372 aaKnown RBP1.38□□□□□ -2.19
CDKL5-207ENST00000624700 EMP2P54851 167 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 BATFQ16520 125 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 FAM78BQ5VT40 261 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 NAA40Q86UY6 237 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 ASB17Q8WXJ9 295 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 CMTM5Q96DZ9 223 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 SFRP2Q96HF1 295 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 NMNAT3Q96T66 252 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 DERL2Q9GZP9 239 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 PLEKHJ1Q9NW61 149 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 FKBP14Q9NWM8 211 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 POLR1DQ9Y2S0 133 aa1.38□□□□□ -2.19
CDKL5-207ENST00000624700 HMGXB3Q12766 1538 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms