RNA–Protein interactions for RNA: ENST00000624193.1

ATRX-215, Transcript of ATRX, chromatin remodeler, human

TSL 4

Gene ATRX, Length 463 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-215	ENST00000624193	RANGRF	Q9HD47	186 aa	Predicted RBP	11.7	□□□□□ -0.54
ATRX-215	ENST00000624193	RETN	Q9HD89	108 aa		11.7	□□□□□ -0.54
ATRX-215	ENST00000624193	METTL1	Q9UBP6	276 aa	Known RBP	11.7	□□□□□ -0.54
ATRX-215	ENST00000624193	ANAPC10	Q9UM13	185 aa		11.7	□□□□□ -0.54
ATRX-215	ENST00000624193	WASHC3	Q9Y3C0	194 aa		11.7	□□□□□ -0.54
ATRX-215	ENST00000624193	RAB29	O14966	203 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	BET1	O15155	118 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	CA2	P00918	260 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	APOA1	P02647	267 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	MC5R	P33032	325 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	TALDO1	P37837	337 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	GNG2	P59768	71 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	MRPS15	P82914	257 aa	Known RBP	11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	ZNF562	Q6V9R5	426 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	H1FOO	Q8IZA3	346 aa	Predicted RBP	11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	GRPEL2	Q8TAA5	225 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	ACOT12	Q8WYK0	555 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	S100A16	Q96FQ6	103 aa	Known RBP	11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	TUBA4B	Q9H853	241 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	ZNF355P	Q9NSJ1	428 aa		11.69	□□□□□ -0.54
ATRX-215	ENST00000624193	C13orf42	A0A1B0GVH6	325 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	ANKRD34B	A5PLL1	514 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193		H0Y980	276 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	RBBP9	O75884	186 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	LINC00205	P59089	165 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	PSG5	Q15238	335 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	TMEM69	Q5SWH9	247 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	IL34	Q6ZMJ4	242 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	GTSCR1	Q86UQ5	136 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	HOGA1	Q86XE5	327 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	OR5AN1	Q8NGI8	311 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	OR9G4	Q8NGQ1	327 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	CMTM3	Q96MX0	182 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	THAP7	Q9BT49	309 aa	Predicted RBP	11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	DIABLO	Q9NR28	239 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	TNC	P24821	2201 aa		11.68	□□□□□ -0.54
ATRX-215	ENST00000624193	MEIS3P1	A6NDR6	274 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	FCER2	P06734	321 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	SYNJ2BP	P57105	145 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	KLF5	Q13887	457 aa	Predicted RBP	11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	POC5	Q8NA72	575 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	RNF5	Q99942	180 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	FAM110A	Q9BQ89	295 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	SLIRP	Q9GZT3	109 aa	Known RBP	11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	CCDC59	Q9P031	241 aa	Known RBP	11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	ANXA10	Q9UJ72	324 aa		11.67	□□□□□ -0.54
ATRX-215	ENST00000624193	CTDSP2	O14595	271 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	TUSC2	O75896	110 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	FXYD3	Q14802	87 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	LCN12	Q6JVE5	192 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	LAX1	Q8IWV1	398 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	DRAXIN	Q8NBI3	349 aa	Predicted RBP	11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	BEST4	Q8NFU0	473 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	OR5T1	Q8NG75	326 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	OR10J5	Q8NHC4	309 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	IL17D	Q8TAD2	202 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	EDARADD	Q8WWZ3	215 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	AP3S1	Q92572	193 aa		11.66	□□□□□ -0.54
ATRX-215	ENST00000624193	IGKV1D-13	A0A0B4J2D9	117 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193		A0A0G2JLM5	398 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193		H3BUA1	57 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	SPDEF	O95238	335 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	IGLV2-14	P01704	120 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	IGKV1-16	P04430	117 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	IGKV1-13	P0DP09	117 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	NFYA	P23511	347 aa	Predicted RBP	11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	DEFA5	Q01523	94 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	CNIH2	Q6PI25	160 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	ZNF383	Q8NA42	475 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	GPX8	Q8TED1	209 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	TSNAX	Q99598	290 aa	Known RBP	11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	OR2D2	Q9H210	308 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	HIPK2	Q9H2X6	1198 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	SDHAF2	Q9NX18	166 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	ADAM30	Q9UKF2	790 aa		11.65	□□□□□ -0.54
ATRX-215	ENST00000624193	IZUMO1R	A6ND01	250 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	SLC25A17	O43808	307 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	CSN3	P07498	182 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	NAT1	P18440	290 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	RPS16	P62249	146 aa	Known RBP	11.64	□□□□□ -0.55
ATRX-215	ENST00000624193		Q8N402	240 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	ABHD1	Q96SE0	405 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	NXF2	Q9GZY0	626 aa	Known RBP	11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	PLEKHA3	Q9HB20	300 aa		11.64	□□□□□ -0.55
ATRX-215	ENST00000624193	TRBV12-3	P01733	135 aa		11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	SSBP2	P81877	361 aa	Predicted RBP	11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	SNX29P2	Q8IUI4	249 aa		11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	LYSMD2	Q8IV50	215 aa		11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	GINS4	Q9BRT9	223 aa		11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	EXTL2	Q9UBQ6	330 aa		11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	PEF1	Q9UBV8	284 aa	Known RBP	11.63	□□□□□ -0.55
ATRX-215	ENST00000624193	CNIH1	O95406	144 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	CTXN2	P0C2S0	81 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	PRSS3	P35030	304 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	CBX5	P45973	191 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	CD81	P60033	236 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	PJVK	Q0ZLH3	352 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	EIF4EBP1	Q13541	118 aa	Predicted RBP	11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	ZNF343	Q6P1L6	599 aa		11.62	□□□□□ -0.55
ATRX-215	ENST00000624193	MZT2A	Q6P582	158 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms