RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 FAM53AQ6NSI3 398 aaPredicted RBP11.8□□□□□ -0.52
LDB3-209ENST00000623056 POM121L2Q96KW2 1035 aa11.8□□□□□ -0.52
LDB3-209ENST00000623056 RNF2Q99496 336 aa11.8□□□□□ -0.52
LDB3-209ENST00000623056 ZNF586Q9NXT0 402 aa11.8□□□□□ -0.52
LDB3-209ENST00000623056 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
LDB3-209ENST00000623056 SIT1Q9Y3P8 196 aa11.8□□□□□ -0.52
LDB3-209ENST00000623056 MED12LQ86YW9 2145 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 SNURFLB1AK76 121 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 RAB29O14966 203 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 NDUFB8O95169 186 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 GPX1P07203 203 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 TDGF1P13385 188 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 RAC2P15153 192 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 SPATA45Q537H7 98 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 H2BFWTQ7Z2G1 175 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 C1orf174Q8IYL3 243 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 ZBTB34Q8NCN2 500 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 GNB4Q9HAV0 340 aa11.79□□□□□ -0.52
LDB3-209ENST00000623056 RRHO14718 337 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 KLF7O75840 302 aaPredicted RBP11.78□□□□□ -0.52
LDB3-209ENST00000623056 GNG10P50151 68 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 ZXDAP98168 799 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 CATR1Q13166 79 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 STPG4Q8N801 248 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 LINC00470Q9BZP3 86 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 ZNF703Q9H7S9 590 aaPredicted RBP11.78□□□□□ -0.52
LDB3-209ENST00000623056 YTHDF2Q9Y5A9 579 aaKnown RBP11.78□□□□□ -0.52
LDB3-209ENST00000623056 LY6G6EA0A0G2JKS1 128 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 NEURL1O76050 574 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 STAG3L2P0CL84 134 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 STAG3L3P0CL85 134 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 OR2M7Q8NG81 312 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 TBL2Q9Y4P3 447 aaKnown RBP11.78□□□□□ -0.52
LDB3-209ENST00000623056 U3KQA8 63 aa11.78□□□□□ -0.52
LDB3-209ENST00000623056 SH2D1BO14796 132 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 CXorf1O96002 111 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 IGHEP01854 428 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 SUMO1P63165 101 aaKnown RBP11.77□□□□□ -0.52
LDB3-209ENST00000623056 OR52L2PQ8NGH6 319 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 COL25A1Q9BXS0 654 aaPredicted RBP11.77□□□□□ -0.52
LDB3-209ENST00000623056 FSCN3Q9NQT6 498 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 UQCR10Q9UDW1 63 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 R4GN57 208 aa11.77□□□□□ -0.52
LDB3-209ENST00000623056 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
LDB3-209ENST00000623056 OPRK1P41145 380 aa11.77□□□□□ -0.53
LDB3-209ENST00000623056 RPEL1Q2QD12 228 aa11.77□□□□□ -0.53
LDB3-209ENST00000623056 WDR86Q86TI4 376 aa11.77□□□□□ -0.53
LDB3-209ENST00000623056 MMD2Q8IY49 270 aa11.77□□□□□ -0.53
LDB3-209ENST00000623056 NRN1Q9NPD7 142 aa11.77□□□□□ -0.53
LDB3-209ENST00000623056 HYPMO75409 117 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 OR5G3P0C626 314 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 IGLC2P0DOY2 106 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 IGLC3P0DOY3 106 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 GDF1P27539 372 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 RPL31P62899 125 aaKnown RBP11.76□□□□□ -0.53
LDB3-209ENST00000623056 TGFBR3Q03167 851 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 ST6GALNAC3Q8NDV1 305 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 STARD4Q96DR4 205 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 DEPPQ9NTK1 212 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 KCNIP1Q9NZI2 227 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 TRBV9A0A0B4J1U6 114 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 C20orf202A1L168 122 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 A8MXE2 369 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 MPDU1O75352 247 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 LINC00205P59089 165 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 ERVK11-1P61568 191 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 SPATA46Q5T0L3 261 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 TREML4Q6UXN2 200 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 TUSC5Q8IXB3 177 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 ARL6IP6Q8N6S5 226 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 SCCPDHQ8NBX0 429 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 GALMQ96C23 342 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 TXN2Q99757 166 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 SFXN3Q9BWM7 321 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 GNB1LQ9BYB4 327 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 LAMTOR2Q9Y2Q5 125 aa11.76□□□□□ -0.53
LDB3-209ENST00000623056 PINLYPA6NC86 204 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 AQP7O14520 342 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 MMP23AO75900 390 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 ARR3P36575 388 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 AMTP48728 403 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 GFRA1P56159 465 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 PLP2Q04941 152 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 SRYQ05066 204 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 PDLIM3Q53GG5 364 aaPredicted RBP11.75□□□□□ -0.53
LDB3-209ENST00000623056 MIC13Q5XKP0 118 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 Q6ZN92 141 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 OR8I2Q8N0Y5 310 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 TAAR6Q96RI8 345 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 MGST2Q99735 147 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 CCL25O15444 150 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 ZNF253O75346 499 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 WISP2O76076 250 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 NXPH2O95156 264 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 HNRNPA3P51991 378 aaKnown RBP11.75□□□□□ -0.53
LDB3-209ENST00000623056 HTD2P86397 168 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 Q8IYB0 196 aa11.75□□□□□ -0.53
LDB3-209ENST00000623056 RNASE8Q8TDE3 154 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms