RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 CD82P27701 267 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 TMEM140Q9NV12 185 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 ZNF586Q9NXT0 402 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 CLCF1Q9UBD9 225 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 USF3Q68DE3 2245 aa10.84□□□□□ -0.67
MSH6-215ENST00000622629 RAMP3O60896 148 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 ZNF124Q15973 351 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 SLC35E4Q6ICL7 350 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 ACP7Q6ZNF0 438 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 KDF1Q8NAX2 398 aaPredicted RBP10.83□□□□□ -0.68
MSH6-215ENST00000622629 CLDND2Q8NHS1 167 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 FAM216AQ8WUB2 273 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 QTRT1Q9BXR0 403 aaKnown RBP10.83□□□□□ -0.68
MSH6-215ENST00000622629 MED13Q9UHV7 2174 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 RAB4AP20338 218 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 LRRC75BQ2VPJ9 315 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 ZNF324BQ6AW86 544 aaPredicted RBP10.83□□□□□ -0.68
MSH6-215ENST00000622629 SPSB4Q96A44 273 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 PSMG3Q9BT73 122 aaPredicted RBP10.83□□□□□ -0.68
MSH6-215ENST00000622629 SPRR3Q9UBC9 169 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 A0A087X0M5 115 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 A0A1B0GX30 115 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 PDE6DO43924 150 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 IL18BPO95998 194 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 HABP2Q14520 560 aaPredicted RBP10.83□□□□□ -0.68
MSH6-215ENST00000622629 HSBP1L1C9JCN9 74 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 SUMO1P63165 101 aaKnown RBP10.83□□□□□ -0.68
MSH6-215ENST00000622629 SLC35B1P78383 322 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 TFF3Q07654 80 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 ICAM4Q14773 271 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 C9orf106Q8NAJ2 232 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 P2RX4Q99571 388 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 FKBP11Q9NYL4 201 aa10.83□□□□□ -0.68
MSH6-215ENST00000622629 CXorf1O96002 111 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 HOXB1P14653 301 aaPredicted RBP10.82□□□□□ -0.68
MSH6-215ENST00000622629 CHRNB4P30926 498 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 IQCJQ1A5X6 159 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 C20orf204Q6ZNR8 217 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 PRNDQ9UKY0 176 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 OR51B2Q9Y5P1 312 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 RTP5Q14D33 572 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 Q8WTZ3 238 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 VSIRQ9H7M9 311 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 TECRQ9NZ01 308 aaKnown RBP10.82□□□□□ -0.68
MSH6-215ENST00000622629 METTL1Q9UBP6 276 aaKnown RBP10.82□□□□□ -0.68
MSH6-215ENST00000622629 TCF19Q9Y242 345 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 J3QW42 95 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 LYL1P12980 280 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 CRISP2P16562 243 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 NMSQ5H8A3 153 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 TCTEX1D1Q8N7M0 179 aa10.82□□□□□ -0.68
MSH6-215ENST00000622629 CXorf65A6NEN9 183 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 C16orf97H3BN30 126 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 PSPNO60542 156 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 CDX1P47902 265 aaPredicted RBP10.81□□□□□ -0.68
MSH6-215ENST00000622629 HERPUD1Q15011 391 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 A0A1W2PRD5 423 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 A0A1W2PRF3 423 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 A0A1W2PRM7 423 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 FAM90A27PA6NNH2 459 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 HSBP1O75506 76 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 CD59P13987 128 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 TPPP2P59282 170 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 ZNF497Q6ZNH5 498 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 LYPD6Q86Y78 171 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 FLYWCH2Q96CP2 140 aaKnown RBP10.81□□□□□ -0.68
MSH6-215ENST00000622629 GP6Q9HCN6 339 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 ANAPC10Q9UM13 185 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 IGHV3-72A0A0B4J1Y9 119 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 A0A0G2JRQ6 117 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 HELTA6NFD8 242 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 KBTBD11O94819 623 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 CLEC3BP05452 202 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 IER3P46695 156 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 RPL29P47914 159 aaKnown RBP10.81□□□□□ -0.68
MSH6-215ENST00000622629 CAMPP49913 170 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 MRPL54Q6P161 138 aaKnown RBP10.81□□□□□ -0.68
MSH6-215ENST00000622629 GTF3AQ92664 365 aaKnown RBP10.81□□□□□ -0.68
MSH6-215ENST00000622629 WFIKKN1Q96NZ8 548 aa10.81□□□□□ -0.68
MSH6-215ENST00000622629 IGHV3-21A0A0B4J1V1 117 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 CLN5O75503 358 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 IGHV3-48P01763 117 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 OR10J1P30954 320 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 LRP11Q86VZ4 500 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 TGIF2LYQ8IUE0 185 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 TGIF2LXQ8IUE1 241 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 TMEM167BQ9NRX6 74 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 SLC25A10Q9UBX3 287 aaPredicted RBP10.8□□□□□ -0.68
MSH6-215ENST00000622629 PRUNE2Q8WUY3 3088 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 RBP4P02753 201 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 SLC25A5P05141 298 aaKnown RBP10.8□□□□□ -0.68
MSH6-215ENST00000622629 ACAA1P09110 424 aaPredicted RBP10.8□□□□□ -0.68
MSH6-215ENST00000622629 ARL14EPLP0DKL9 152 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 TNXAQ16473 311 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 RPEQ96AT9 228 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 ASCL4Q6XD76 172 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 NPCDR1Q9BY65 106 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 IQCF6A8MYZ5 107 aa10.8□□□□□ -0.68
MSH6-215ENST00000622629 ARSJQ5FYB0 599 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms