RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 A0A0U1RQK1 487 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 CCSO14618 274 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 IGKV1-16P04430 117 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 C4BPBP20851 252 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 ARHGDIBP52566 201 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 ZNF680Q8NEM1 530 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 OR8H1Q8NGG4 311 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 RNASE11Q8TAA1 199 aaKnown RBP14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 RAB18Q9NP72 206 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 NUP50Q9UKX7 468 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 FAM96BQ9Y3D0 163 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 PIGBOS1A0A0B4J2F0 54 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 FAM25EA8MYX2 175 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 FSHBP01225 129 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 IFNA21P01568 189 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 AKR1C2P52895 323 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 OPCMLQ14982 345 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 TMEM65Q6PI78 240 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 CFHR4Q92496 578 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 FLYWCH2Q96CP2 140 aaKnown RBP14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 COMMD9Q9P000 198 aa14.35□□□□□ -0.11
PTCHD3-202ENST00000622555 DUXBA0A1W2PPF3 345 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 ATG12O94817 140 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 KRASP01116 189 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 G6PCP35575 357 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 HTR2BP41595 481 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 BPIFB3P59826 476 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 GGNBP1Q5YKI7 109 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 R3HDM4Q96D70 268 aa14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 MS4A7Q9GZW8 240 aaPredicted RBP14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 SOX21Q9Y651 276 aaPredicted RBP14.34□□□□□ -0.11
PTCHD3-202ENST00000622555 C13orf42A0A1B0GVH6 325 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 C5orf51A6NDU8 294 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 L7N2F9 121 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 SHOXO15266 292 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 TSC22D2O75157 780 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 SLC25A4P12235 298 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 CD1BP29016 333 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 HABP2Q14520 560 aaPredicted RBP14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 TEX29Q8N6K0 151 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 OR4C13Q8NGP0 309 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 RRNAD1Q96FB5 475 aaKnown RBP14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 SEC22AQ96IW7 307 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 TMED3Q9Y3Q3 217 aa14.33□□□□□ -0.12
PTCHD3-202ENST00000622555 MARCH11A6NNE9 402 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 VENTXO95231 258 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 IGKV1-5P01602 117 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 NQO2P16083 231 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 VDAC1P21796 283 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 CD24P25063 80 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 ERVK-16P61578 105 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 RPS16P62249 146 aaKnown RBP14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 FGL1Q08830 312 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 TMEM177Q53S58 311 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 FAM120AOSQ5T036 256 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 SSX9Q7RTT3 188 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 VKORC1L1Q8N0U8 176 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 DMBX1Q8NFW5 382 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 OSR1Q8TAX0 266 aaPredicted RBP14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 HARBI1Q96MB7 349 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 CELSR1Q9NYQ6 3014 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 MPTX1A8MV57 137 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 HRASP01112 189 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 IGKV1D-33P01593 117 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 IGKV1-33P01594 117 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 FBP1P09467 338 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 CD99P14209 185 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 BRS3P32247 399 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 GSG1LQ6UXU4 331 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 SMR3AQ99954 134 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 PDCD10Q9BUL8 212 aa14.32□□□□□ -0.12
PTCHD3-202ENST00000622555 SONP18583 2426 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 A0A0G2JRQ6 117 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 SNRNP70P08621 437 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 S100A11P31949 105 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 HES1Q14469 280 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 NMSQ5H8A3 153 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 IL17RELQ6ZVW7 336 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 TMUB2Q71RG4 321 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 H2BFWTQ7Z2G1 175 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 BCL6BQ8N143 479 aaPredicted RBP14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 C22orf15Q8WYQ4 148 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 LSM10Q969L4 123 aaKnown RBP14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 OR10C1Q96KK4 312 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 RHOVQ96L33 236 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 TMUB1Q9BVT8 246 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 MMP24Q9Y5R2 645 aa14.31□□□□□ -0.12
PTCHD3-202ENST00000622555 SVEP1Q4LDE5 3571 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 SRRM4A7MD48 611 aaKnown RBP14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 CFDP00746 253 aaPredicted RBP14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 IFNA7P01567 189 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 HNF4GQ14541 408 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 IZUMO4Q1ZYL8 232 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 GPR146Q96CH1 333 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 RITA1Q96K30 269 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 AIFM2Q9BRQ8 373 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 MEGF9Q9H1U4 602 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 NAV3Q8IVL0 2385 aa14.3□□□□□ -0.12
PTCHD3-202ENST00000622555 FXYD6-FXYD2A0A087WZ82 144 aa14.29□□□□□ -0.12
PTCHD3-202ENST00000622555 CYSRT1A8MQ03 144 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms