RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 VDAC1P21796 283 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 TAS2R19P59542 299 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 CATR1Q13166 79 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 VMA21Q3ZAQ7 101 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 TEX38Q6PEX7 206 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 C18orf65Q6ZTR6 163 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 MRPL41Q8IXM3 137 aaKnown RBP16.51■□□□□ 0.23
PMPCA-212ENST00000622209 TEX45Q8NA69 505 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 OR4S2Q8NH73 311 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 PARP11Q9NR21 331 aa16.51■□□□□ 0.23
PMPCA-212ENST00000622209 M0QYG6 137 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 ATP6V0E1O15342 81 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 TNFSF12O43508 249 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 GSTZ1O43708 216 aaPredicted RBP16.5■□□□□ 0.23
PMPCA-212ENST00000622209 DUS4LO95620 317 aaKnown RBP16.5■□□□□ 0.23
PMPCA-212ENST00000622209 CD74P04233 296 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 UCP3P55916 312 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 UBE2KP61086 200 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 RPL23AP62750 156 aaKnown RBP16.5■□□□□ 0.23
PMPCA-212ENST00000622209 OR2B11Q5JQS5 317 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 ETV3LQ6ZN32 361 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 CMTM1Q8IZ96 169 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 ARRDC1Q8N5I2 433 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 CLCC1Q96S66 551 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 GPHA2Q96T91 129 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 FXYD6Q9H0Q3 95 aa16.5■□□□□ 0.23
PMPCA-212ENST00000622209 NUDT19A8MXV4 375 aa16.49■□□□□ 0.23
PMPCA-212ENST00000622209 RBFOX2O43251 390 aaKnown RBP eCLIP16.49■□□□□ 0.23
PMPCA-212ENST00000622209 CRIP2P52943 208 aaPredicted RBP16.49■□□□□ 0.23
PMPCA-212ENST00000622209 BRWD1-AS2P59051 145 aa16.49■□□□□ 0.23
PMPCA-212ENST00000622209 CFHR3Q02985 330 aa16.49■□□□□ 0.23
PMPCA-212ENST00000622209 TINAGL1Q9GZM7 467 aaPredicted RBP16.49■□□□□ 0.23
PMPCA-212ENST00000622209 TPSG1Q9NRR2 321 aa16.49■□□□□ 0.23
PMPCA-212ENST00000622209 ZFP57Q9NU63 452 aa16.49■□□□□ 0.23
PMPCA-212ENST00000622209 NBEAL2Q6ZNJ1 2754 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 GPR31O00270 319 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 CA2P00918 260 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 IGHG4P01861 327 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 TMEM267Q0VDI3 215 aaPredicted RBP16.48■□□□□ 0.23
PMPCA-212ENST00000622209 FOXE3Q13461 319 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 STEAP1BQ6NZ63 245 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 C8orf86Q6ZUL3 223 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 CD300LFQ8TDQ1 290 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 AIFM2Q9BRQ8 373 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 WSB1Q9Y6I7 421 aa16.48■□□□□ 0.23
PMPCA-212ENST00000622209 DNAH9Q9NYC9 4486 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 TRAV41A0A0B4J266 112 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 PGLYRP1O75594 196 aaPredicted RBP16.47■□□□□ 0.23
PMPCA-212ENST00000622209 RAB3DO95716 219 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 HRASP01112 189 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 ELANEP08246 267 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 EGR2P11161 476 aaPredicted RBP16.47■□□□□ 0.23
PMPCA-212ENST00000622209 PTBP1P26599 531 aaKnown RBP eCLIP16.47■□□□□ 0.23
PMPCA-212ENST00000622209 S100GP29377 79 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 PPIFP30405 207 aaKnown RBP16.47■□□□□ 0.23
PMPCA-212ENST00000622209 NDPQ00604 133 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 MEF2DQ14814 521 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 AADACL3Q5VUY0 350 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 LHFPL1Q86WI0 220 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 SLC38A6Q8IZM9 456 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 SPAG16Q8N0X2 631 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 RNF152Q8N8N0 203 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 POC5Q8NA72 575 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 RSRP1Q9BUV0 290 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 NUBP2Q9Y5Y2 271 aa16.47■□□□□ 0.23
PMPCA-212ENST00000622209 G3V318 75 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 CNIH1O95406 144 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 EGFEM1PQ0D2K5 195 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 FXYD3Q14802 87 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 C11orf87Q6NUJ2 197 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 CCDC190Q86UF4 302 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 TCTEX1D1Q8N7M0 179 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 MINDY2Q8NBR6 621 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 KLHL30-AS1Q8NEE0 82 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 OR51H1Q8NH63 302 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 VSTM2AQ8TAG5 236 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 ABHD5Q8WTS1 349 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 DPF1Q92782 380 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 DUX3Q96PT4 197 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 FBXO7Q9Y3I1 522 aa16.46■□□□□ 0.23
PMPCA-212ENST00000622209 COL7A1Q02388 2944 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 CREBL2O60519 120 aaPredicted RBP16.45■□□□□ 0.22
PMPCA-212ENST00000622209 HPRT1P00492 218 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 AKAIN1P0CW23 69 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 SAA1P0DJI8 122 aaPredicted RBP16.45■□□□□ 0.22
PMPCA-212ENST00000622209 PJVKQ0ZLH3 352 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 PRSS8Q16651 343 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 AKIRIN2Q53H80 203 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 C19orf54Q5BKX5 351 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 CXorf66Q5JRM2 361 aaPredicted RBP16.45■□□□□ 0.22
PMPCA-212ENST00000622209 OR4D10Q8NGI6 311 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 TERB2Q8NHR7 220 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 ARPC1AQ92747 370 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 GPR61Q9BZJ8 451 aa16.45■□□□□ 0.22
PMPCA-212ENST00000622209 ANKRD20A5PA0PJZ0 165 aa16.44■□□□□ 0.22
PMPCA-212ENST00000622209 ARPC1BO15143 372 aaKnown RBP16.44■□□□□ 0.22
PMPCA-212ENST00000622209 RAMP3O60896 148 aa16.44■□□□□ 0.22
PMPCA-212ENST00000622209 OR2A4O95047 310 aa16.44■□□□□ 0.22
PMPCA-212ENST00000622209 IGLV1-40P01703 118 aa16.44■□□□□ 0.22
PMPCA-212ENST00000622209 F2RP25116 425 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms