RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 TICRRQ7Z2Z1 1910 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 EPG5Q9HCE0 2579 aa7.82□□□□□ -1.16
GGA3-223ENST00000621870 HMSDA8MTL9 139 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 HYPMO75409 117 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 ORM1P02763 201 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 LINC00869P0C866 280 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 USF1P22415 310 aaPredicted RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 P2RY4P51582 365 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 TCF15Q12870 199 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 RBPMS2Q6ZRY4 209 aaKnown RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 MYPOPQ86VE0 399 aaPredicted RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 OR2T10Q8NGZ9 312 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 FAM216AQ8WUB2 273 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 ALX4Q9H161 411 aaPredicted RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 GATCO43716 136 aaKnown RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 S100A8P05109 93 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 CD24P25063 80 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 C9orf62Q8N4C0 152 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 TCTEX1D1Q8N7M0 179 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 GPR146Q96CH1 333 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 RNF2Q99496 336 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 QTRT1Q9BXR0 403 aaKnown RBP7.81□□□□□ -1.16
GGA3-223ENST00000621870 TCF19Q9Y242 345 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 ABCA12Q86UK0 2595 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 DUXBA0A1W2PPF3 345 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 ATP6V0CP27449 155 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 TMEM241Q24JQ0 296 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 ZNF818PQ6ZRF7 136 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 TMSB15BA0A087X1C1 80 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 PRR32B1ATL7 298 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 LY6HO94772 140 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 IL18BPO95998 194 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 THBDP07204 575 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 GALR1P47211 349 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 ZNF137PP52743 207 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 OR10S1Q8NGN2 331 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 RSG1Q9BU20 258 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 GHITMQ9H3K2 345 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 UFC1Q9Y3C8 167 aa7.81□□□□□ -1.16
GGA3-223ENST00000621870 C11orf94C9JXX5 98 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 HSBP1O75506 76 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 PF4P02776 101 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 TCL1AP56279 114 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 ANKRD55Q3KP44 614 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 ZNF672Q499Z4 452 aaPredicted RBP7.8□□□□□ -1.16
GGA3-223ENST00000621870 Q5BKY6 102 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 C16orf82Q7Z2V1 217 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 COMMD1Q8N668 190 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 STXBP6Q8NFX7 210 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 S4R3C0 116 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 LRRK1Q38SD2 2015 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 PAGE4O60829 102 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 RD3LP0DJH9 198 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 COL8A1P27658 744 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 SLC35E3Q7Z769 313 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 RPRMLQ8N4K4 120 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 PAQR4Q8N4S7 273 aaPredicted RBP7.8□□□□□ -1.16
GGA3-223ENST00000621870 IGKV1-9A0A0C4DH69 117 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 CGB1A6NKQ9 187 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 EIF3GO75821 320 aaKnown RBP eCLIP7.8□□□□□ -1.16
GGA3-223ENST00000621870 SFTA3P0C7M3 94 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 SELLP14151 372 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 CA7P43166 264 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 PEAR1Q5VY43 1037 aaPredicted RBP7.8□□□□□ -1.16
GGA3-223ENST00000621870 WDR82Q6UXN9 313 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 OR4B1Q8NGF8 309 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 TMEM37Q8WXS4 190 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 SLX1AQ9BQ83 275 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 SLC35B3Q9H1N7 401 aa7.8□□□□□ -1.16
GGA3-223ENST00000621870 IGHV3OR16-12A0A075B7B8 117 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 IGHV3-49A0A0A0MS15 119 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 KBTBD11-OT1A0A1B0GTJ5 212 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 CORTO00230 105 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 IGKV1D-33P01593 117 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 IGKV1-33P01594 117 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 IGHV1-46P01743 117 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 PGA5P0DJD9 388 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 C2CD4CQ8TF44 421 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 TMEM204Q9BSN7 226 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 C5orf66Q9H5L9 145 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 AURKAIP1Q9NWT8 199 aaPredicted RBP7.79□□□□□ -1.16
GGA3-223ENST00000621870 NAT8BQ9UHF3 227 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 HIGD1AQ9Y241 93 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 SCN8AQ9UQD0 1980 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 A0A0G2JK05 382 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 SEC14L6B5MCN3 397 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 MFAP4P55083 255 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 FAM106AQ4KMX7 169 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 DTX1Q86Y01 620 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 C11orf42Q8N5U0 333 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 OR1L6Q8NGR2 347 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 LURAP1Q96LR2 239 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 OR5AC2Q9NZP5 309 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 CLPSP04118 112 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 FABP4P15090 132 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 FCER1GP30273 86 aa7.79□□□□□ -1.16
GGA3-223ENST00000621870 FCGR2BP31994 310 aaPredicted RBP7.79□□□□□ -1.16
GGA3-223ENST00000621870 RPS11P62280 158 aaKnown RBP eCLIP7.79□□□□□ -1.16
GGA3-223ENST00000621870 SELENOTP62341 195 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms