RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 H0YJW9 148 aa17.45■□□□□ 0.38
SPAST-204ENST00000621856 IFNA17P01571 189 aa17.45■□□□□ 0.38
SPAST-204ENST00000621856 HLA-DRB5Q30154 266 aa17.45■□□□□ 0.38
SPAST-204ENST00000621856 SPANXN5Q5MJ07 72 aa17.45■□□□□ 0.38
SPAST-204ENST00000621856 OR5C1Q8NGR4 320 aa17.45■□□□□ 0.38
SPAST-204ENST00000621856 DTD1Q8TEA8 209 aa17.45■□□□□ 0.38
SPAST-204ENST00000621856 RBMXL1Q96E39 390 aaKnown RBP17.45■□□□□ 0.38
SPAST-204ENST00000621856 M0R1W7 72 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 SULT1A1P50225 295 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 SPINK9Q5DT21 86 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 SP5Q6BEB4 398 aaPredicted RBP17.44■□□□□ 0.38
SPAST-204ENST00000621856 OR4A47Q6IF82 309 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 PNKDQ8N490 385 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 OR5AN1Q8NGI8 311 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 OR1S2Q8NGQ3 325 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 ZDHHC16Q969W1 377 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 NUP50Q9UKX7 468 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 TRAV3A0A0B4J244 114 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 SHOXO15266 292 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 IGLV1-47P01700 117 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 IGKV1-16P04430 117 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 RELBQ01201 579 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 POU2AF1Q16633 256 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 Q8N7P7 452 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 BEND2Q8NDZ0 799 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 CXorf58Q96LI9 332 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 CIB3Q96Q77 187 aaPredicted RBP17.44■□□□□ 0.38
SPAST-204ENST00000621856 AIFM2Q9BRQ8 373 aa17.44■□□□□ 0.38
SPAST-204ENST00000621856 AMMECR1Q9Y4X0 333 aaPredicted RBP17.44■□□□□ 0.38
SPAST-204ENST00000621856 AKAP6Q13023 2319 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 FBXO24O75426 580 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 METTL15P1P0C7V9 234 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 ZNF266Q14584 549 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 COMMD7Q86VX2 200 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 CLDND2Q8NHS1 167 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 OSR1Q8TAX0 266 aaPredicted RBP17.43■□□□□ 0.38
SPAST-204ENST00000621856 CITED4Q96RK1 184 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 PCGF1Q9BSM1 259 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 SIRT7Q9NRC8 400 aa17.43■□□□□ 0.38
SPAST-204ENST00000621856 ARHGAP32A7KAX9 2087 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 ENSAO43768 121 aaKnown RBP17.42■□□□□ 0.38
SPAST-204ENST00000621856 S100A1P23297 94 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 SPCS3P61009 180 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 AARDQ4LEZ3 155 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 PDPNQ86YL7 162 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 LHX4Q969G2 390 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 HARBI1Q96MB7 349 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 CLCC1Q96S66 551 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 ARV1Q9H2C2 271 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 WASHC3Q9Y3C0 194 aa17.42■□□□□ 0.38
SPAST-204ENST00000621856 BUB1B-PAK6H3BSN5 160 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 ZFP36P26651 326 aaKnown RBP17.41■□□□□ 0.38
SPAST-204ENST00000621856 RAB13P51153 203 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 LCN2P80188 198 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 FLYWCH2Q96CP2 140 aaKnown RBP17.41■□□□□ 0.38
SPAST-204ENST00000621856 GINS3Q9BRX5 216 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 CACFD1Q9UGQ2 172 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 C15orf61A6NNL5 157 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 TMEM177Q53S58 311 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 OR52E5Q8NH55 327 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 LRRC20Q8TCA0 184 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 RNF141Q8WVD5 230 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 ATP5SQ99766 215 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 PIMREGQ9BSJ6 248 aa17.41■□□□□ 0.38
SPAST-204ENST00000621856 STRAPQ9Y3F4 350 aaKnown RBP17.41■□□□□ 0.38
SPAST-204ENST00000621856 LEUTXA8MZ59 168 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 DFFBO76075 338 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 MC5RP33032 325 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 ATP5J2P56134 94 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 HBG1P69891 147 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 HBG2P69892 147 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 ZNF429Q86V71 674 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 KIR3DL3Q8N743 410 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 HSD17B11Q8NBQ5 300 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 OR4C13Q8NGP0 309 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 FAM168AQ92567 244 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 BARX1Q9HBU1 254 aaPredicted RBP17.4■□□□□ 0.38
SPAST-204ENST00000621856 PFDN2Q9UHV9 154 aa17.4■□□□□ 0.38
SPAST-204ENST00000621856 SRRM4A7MD48 611 aaKnown RBP17.39■□□□□ 0.37
SPAST-204ENST00000621856 ARG1P05089 322 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 PRTN3P24158 256 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 LMO4P61968 165 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 RPS16P62249 146 aaKnown RBP17.39■□□□□ 0.37
SPAST-204ENST00000621856 TMEM14EPQ6UXP3 125 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 OR4P4Q8NGL7 312 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 RPEQ96AT9 228 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 OR4C12Q96R67 309 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 PRNDQ9UKY0 176 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 FOXA2Q9Y261 457 aaPredicted RBP17.39■□□□□ 0.37
SPAST-204ENST00000621856 AUP1Q9Y679 476 aa17.39■□□□□ 0.37
SPAST-204ENST00000621856 TET2Q6N021 2002 aaPredicted RBP17.39■□□□□ 0.37
SPAST-204ENST00000621856 UPK2O00526 184 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 SAA1P0DJI8 122 aaPredicted RBP17.38■□□□□ 0.37
SPAST-204ENST00000621856 LILRB2Q8N423 598 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 TSNAXQ99598 290 aaKnown RBP17.38■□□□□ 0.37
SPAST-204ENST00000621856 TCF19Q9Y242 345 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 INSIG2Q9Y5U4 225 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 UBR5O95071 2799 aaPredicted RBP17.38■□□□□ 0.37
SPAST-204ENST00000621856 A8MXK9 166 aa17.38■□□□□ 0.37
SPAST-204ENST00000621856 FGF16O43320 207 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms