RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 MMP24Q9Y5R2 645 aa12.85□□□□□ -0.35
CBWD3-216ENST00000621396 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
CBWD3-216ENST00000621396 ODF3BA8MYP8 253 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 LY6LH3BQJ8 138 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 SHOXO15266 292 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 OR2F2O95006 317 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 OPN1MWP04001 364 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 OPN1MW2P0DN77 364 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 OPN1MW3P0DN78 364 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 CNTFRP26992 372 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 FGL1Q08830 312 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 HNF4GQ14541 408 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 SMCO1Q147U7 214 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 PIP4P2Q8N4L2 257 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 KIR3DL3Q8N743 410 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 LSM10Q969L4 123 aaKnown RBP12.84□□□□□ -0.35
CBWD3-216ENST00000621396 C7orf69Q9H7B7 122 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 TMEM140Q9NV12 185 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 RCL1Q9Y2P8 373 aaKnown RBP12.84□□□□□ -0.35
CBWD3-216ENST00000621396 H3BP45 60 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 TIMM23O14925 209 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 TGFAP01135 160 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 NQO2P16083 231 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 PAX8Q06710 450 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 RTL8BQ17RB0 113 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 HARBI1Q96MB7 349 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 MFFQ9GZY8 342 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 UNKLQ9H9P5 680 aaKnown RBP12.84□□□□□ -0.35
CBWD3-216ENST00000621396 DPM3Q9P2X0 92 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 MYO9AB2RTY4 2548 aa12.84□□□□□ -0.35
CBWD3-216ENST00000621396 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 CENPVL3A0A0U1RRI6 287 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 B4DSR2 109 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 PITX3O75364 302 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 DEDDO75618 318 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 TMEM50AO95807 157 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 P0C879 139 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 IL3RAP26951 378 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 LGALS4P56470 323 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 OR4A47Q6IF82 309 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 LRRC75A-AS1Q8N1F1 130 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 ADTRPQ96IZ2 230 aa12.83□□□□□ -0.35
CBWD3-216ENST00000621396 POLR3KQ9Y2Y1 108 aaPredicted RBP12.83□□□□□ -0.35
CBWD3-216ENST00000621396 A0A1B0GU03 582 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 A0A1W2PPI3 338 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 RNF222A6NCQ9 220 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 WRBO00258 174 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 ST8SIA3O43173 380 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 CHST1O43916 411 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 APOA2P02652 100 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.36
CBWD3-216ENST00000621396 IGHV4-38-2P0DP08 117 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 IAPPP10997 89 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 SAA4P35542 130 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 RPS16P62249 146 aaKnown RBP12.83□□□□□ -0.36
CBWD3-216ENST00000621396 MIDNQ504T8 468 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 TPTE2P1Q5T6R2 138 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 FLYWCH2Q96CP2 140 aaKnown RBP12.83□□□□□ -0.36
CBWD3-216ENST00000621396 SPIN2AQ99865 258 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 SPIN2BQ9BPZ2 258 aa12.83□□□□□ -0.36
CBWD3-216ENST00000621396 QTRT1Q9BXR0 403 aaKnown RBP12.83□□□□□ -0.36
CBWD3-216ENST00000621396 LEUTXA8MZ59 168 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 RBFOX2O43251 390 aaKnown RBP eCLIP12.82□□□□□ -0.36
CBWD3-216ENST00000621396 PRSS54Q6PEW0 395 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 TCTEX1D1Q8N7M0 179 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 ASB13Q8WXK3 278 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 TNFSF18Q9UNG2 199 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 SMAD7O15105 426 aaKnown RBP12.82□□□□□ -0.36
CBWD3-216ENST00000621396 SAA1P0DJI8 122 aaPredicted RBP12.82□□□□□ -0.36
CBWD3-216ENST00000621396 ID3Q02535 119 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 MBD6Q96DN6 1003 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 ARL6Q9H0F7 186 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 TPSG1Q9NRR2 321 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 AMMECR1Q9Y4X0 333 aaPredicted RBP12.82□□□□□ -0.36
CBWD3-216ENST00000621396 OTOGQ6ZRI0 2925 aa12.82□□□□□ -0.36
CBWD3-216ENST00000621396 CR1P17927 2039 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 L7N2F9 121 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 KIR2DS2P43631 304 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 ERVK-16P61578 105 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 WASHC3Q9Y3C0 194 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 POMT1Q9Y6A1 747 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 SONP18583 2426 aaKnown RBP12.81□□□□□ -0.36
CBWD3-216ENST00000621396 SLC25A4P12235 298 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 UBE2E1P51965 193 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 PJVKQ0ZLH3 352 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 TMEM249Q2WGJ8 235 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 OR4C13Q8NGP0 309 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 C22orf15Q8WYQ4 148 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 AJUBAQ96IF1 538 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 FAM212BQ9NTI7 297 aaPredicted RBP12.81□□□□□ -0.36
CBWD3-216ENST00000621396 ITGB1BP2Q9UKP3 347 aa12.81□□□□□ -0.36
CBWD3-216ENST00000621396 HMSDA8MTL9 139 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 BSCL2Q96G97 398 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-216ENST00000621396 MS4A7Q9GZW8 240 aaPredicted RBP12.8□□□□□ -0.36
CBWD3-216ENST00000621396 SLC25A17O43808 307 aa12.8□□□□□ -0.36
CBWD3-216ENST00000621396 RLN2P04090 185 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms