RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TCF23Q7RTU1 214 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 ATG4DQ86TL0 474 aaPredicted RBP8.51□□□□□ -1.05
COL4A6-210ENST00000621266 COL4A1P02462 1669 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 SCN1AP35498 2009 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 UNC119Q13432 240 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 CHST5Q9GZS9 411 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 TDRD15B5MCY1 1934 aaKnown RBP8.51□□□□□ -1.05
COL4A6-210ENST00000621266 A0A1W2PRS3 328 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 ZG16O60844 167 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 CLDN14O95500 239 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 MAGEA5P43359 124 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM249Q2WGJ8 235 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM155Q4W5P6 130 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 OR2H1Q9GZK4 316 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 IL36BQ9NZH7 164 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 SERF1AO75920 110 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 UCNP55089 124 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 RAC3P60763 192 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 NAA38Q9BRA0 125 aaKnown RBP8.51□□□□□ -1.05
COL4A6-210ENST00000621266 ATG2BQ96BY7 2078 aa8.51□□□□□ -1.05
COL4A6-210ENST00000621266 IGHV3-72A0A0B4J1Y9 119 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 NKX2-8O15522 239 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 PGLYRP1O75594 196 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 ADMP35318 185 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 PRELID3AQ96N28 172 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 NRTNQ99748 197 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 RPS20P60866 119 aaKnown RBP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 PAX2Q02962 417 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 C10orf128Q5T292 105 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 ZNF645Q8N7E2 425 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 OR4A5Q8NH83 315 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 COX11Q9Y6N1 276 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 TRIP11Q15643 1979 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 A8MXK9 166 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 LSM6P62312 80 aaKnown RBP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 RRN3P1Q2M238 152 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 TPTE2P1Q5T6R2 138 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 GOLT1AQ6ZVE7 132 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 NFAM1Q8NET5 270 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 C5orf66Q9H5L9 145 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 NRN1Q9NPD7 142 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 SLC25A10Q9UBX3 287 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 CCL27Q9Y4X3 112 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 LIPT2A6NK58 231 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 ZIC1Q15915 447 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 EBLN2Q6P2I7 272 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 FADS6Q8N9I5 356 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 TIMP4Q99727 224 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 PRDM14Q9GZV8 571 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 RPS11P62280 158 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 ACSF3Q4G176 576 aaPredicted RBP8.5□□□□□ -1.05
COL4A6-210ENST00000621266 LINC00596Q86U02 117 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 KIR2DL4Q99706 377 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 WDR90Q96KV7 1748 aa8.5□□□□□ -1.05
COL4A6-210ENST00000621266 TRBV7-9A0A0J9YWB2 115 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 J3QT63 122 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 C1QCP02747 245 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 C8orf88P0DMB2 117 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 LIFP15018 202 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 GAGE2BQ13066 116 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 C2orf68Q2NKX9 166 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 GAGE2EQ4V326 116 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 BHLHA15Q7RTS1 189 aaPredicted RBP8.49□□□□□ -1.05
COL4A6-210ENST00000621266 DNASE2BQ8WZ79 361 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 PRDM13Q9H4Q3 707 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 EDA2RQ9HAV5 297 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 GAGE2DQ9UEU5 116 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 PRTN3P24158 256 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 TIMM23BQ5SRD1 257 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 C1orf122Q6ZSJ8 110 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 SCGB3A1Q96QR1 104 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 DSPPQ9NZW4 1301 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 ZNFX1Q9P2E3 1918 aaKnown RBP8.49□□□□□ -1.05
COL4A6-210ENST00000621266 ZNF815PA8K554 130 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 REG1AP05451 166 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 FGFRL1Q8N441 504 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 RND2P52198 227 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 SLC25A38Q96DW6 304 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 FAM60AQ9NP50 221 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 CYSLTR1Q9Y271 337 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 A0A1W2PQM1 296 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM262E9PQX1 116 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 IGHV3-48P01763 117 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 GCHFRP30047 84 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 FOXL2P58012 376 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 ZP1P60852 638 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 NUTF2P61970 127 aaKnown RBP8.49□□□□□ -1.05
COL4A6-210ENST00000621266 SRSF3P84103 164 aaKnown RBP8.49□□□□□ -1.05
COL4A6-210ENST00000621266 OR10W1Q8NGF6 305 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM101Q96IK0 257 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 CHODLQ9H9P2 273 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 SCO2A0A1W2PP80 73 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 C1QAP02745 245 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 CD3EP07766 207 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 ZAR1Q86SH2 424 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 MRPS18AQ9NVS2 196 aaKnown RBP8.49□□□□□ -1.05
COL4A6-210ENST00000621266 RNF7Q9UBF6 113 aa8.49□□□□□ -1.05
COL4A6-210ENST00000621266 DLEU1O43261 78 aa8.48□□□□□ -1.05
COL4A6-210ENST00000621266 TMEM56-RWDD3S4R434 201 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms