RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CLN8Q9UBY8 286 aa8.22□□□□□ -1.09
VTA1-205ENST00000620996 hADV38S2A0JD32 116 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 TMEM50AO95807 157 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 DYNLT3P51808 116 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 ZNF134P52741 427 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 ZNF616Q08AN1 781 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 C17orf58Q2M2W7 97 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 NCR3LG1Q68D85 454 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 VKORC1L1Q8N0U8 176 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 C2orf88Q9BSF0 95 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 SH3BGRL3Q9H299 93 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 RAB9BQ9NP90 201 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 SMCO4Q9NRQ5 59 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 C19orf12Q9NSK7 152 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 PSENENQ9NZ42 101 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 ZNRD1Q9P1U0 126 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 DSCAMO60469 2012 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 YLPM1P49750 1951 aaKnown RBP8.21□□□□□ -1.09
VTA1-205ENST00000620996 PKD1L2Q7Z442 2459 aa8.21□□□□□ -1.09
VTA1-205ENST00000620996 RAI1Q7Z5J4 1906 aaPredicted RBP8.21□□□□□ -1.09
VTA1-205ENST00000620996 SIAH2O43255 324 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 PPIHO43447 177 aaKnown RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 SYNGR2O43760 224 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 MMP23AO75900 390 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 LY6HO94772 140 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 CD55P08174 381 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 GNLYP22749 145 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 RPS10P46783 165 aaKnown RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 MSMO1Q15800 293 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 LRRC10Q5BKY1 277 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 HSD17B10Q99714 261 aaKnown RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 ZNF705GA8MUZ8 300 aaPredicted RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 METTL15P1P0C7V9 234 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 RAB4BP61018 213 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 ID3Q02535 119 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 BATFQ16520 125 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 TEX36Q5VZQ5 186 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 LSM10Q969L4 123 aaKnown RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 S1PR3Q99500 378 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 BARX1Q9HBU1 254 aaPredicted RBP8.21□□□□□ -1.1
VTA1-205ENST00000620996 IDI2-AS1Q9NZ38 188 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 LRBAP50851 2863 aa8.21□□□□□ -1.1
VTA1-205ENST00000620996 CEBPZOSA8MTT3 80 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 YPEL1O60688 119 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 FABP4P15090 132 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 HNF1AP20823 631 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 LOXL3P58215 753 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 Q5PR19 223 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 OR8G2PQ6IF36 304 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 ZNF66Q6ZN08 573 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 THNSL2Q86YJ6 484 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 YPEL2Q96QA6 119 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 MMP24Q9Y5R2 645 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 TCF21O43680 179 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 HIST1H1BP16401 226 aaKnown RBP8.2□□□□□ -1.1
VTA1-205ENST00000620996 ERVK-16P61578 105 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 MRPS11P82912 194 aaKnown RBP8.2□□□□□ -1.1
VTA1-205ENST00000620996 Q6ZRG5 221 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 R3HDM4Q96D70 268 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 AGMATQ9BSE5 352 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 UQCC1Q9NVA1 299 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 RFNGQ9Y644 331 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 USF3Q68DE3 2245 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 IFITM10A6NMD0 228 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 F2RL2O00254 374 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 DVL1O14640 695 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 C1QL1O75973 258 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 IFNA17P01571 189 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 DUTP33316 252 aaKnown RBP8.2□□□□□ -1.1
VTA1-205ENST00000620996 CAMLGP49069 296 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 PKIAP61925 76 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 PRB3Q04118 309 aaPredicted RBP8.2□□□□□ -1.1
VTA1-205ENST00000620996 MST1LQ2TV78 715 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 ZNF672Q499Z4 452 aaPredicted RBP8.2□□□□□ -1.1
VTA1-205ENST00000620996 CT45A1Q5HYN5 189 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 CT45A3Q8NHU0 189 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 IFI27L2Q9H2X8 130 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 GAL3ST2Q9H3Q3 398 aa8.2□□□□□ -1.1
VTA1-205ENST00000620996 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 CLEC18AA5D8T8 446 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
VTA1-205ENST00000620996 COL8A2P25067 703 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 RAB7AP51149 207 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 TCF23Q7RTU1 214 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 CLEC18CQ8NCF0 446 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 ZNF714Q96N38 554 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 RAB40CQ96S21 281 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 RBKSQ9H477 322 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 LPAR3Q9UBY5 353 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 CBY3A6NI87 242 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 GAPDHP04406 335 aaKnown RBP8.19□□□□□ -1.1
VTA1-205ENST00000620996 REG1BP48304 166 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 FHITP49789 147 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 UBE2KP61086 200 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 RUNX1Q01196 453 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 ZNF266Q14584 549 aa8.19□□□□□ -1.1
VTA1-205ENST00000620996 FBXL19-AS1Q494R0 122 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms