RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LRRC30A6NM36 301 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 CD59P13987 128 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 FOXG1P55316 489 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 TPPP2P59282 170 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 DAZAP2Q15038 168 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 RNPS1Q15287 305 aaKnown RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 OR2M7Q8NG81 312 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 OR5P3Q8WZ94 311 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 NOL4LQ96MY1 436 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 TAAR6Q96RI8 345 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 WNT5BQ9H1J7 359 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF552Q9H707 407 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 A0A0G2JMM0 328 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 hCG_38984A0A1B0GV85 526 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 A0A1W2PPB8 328 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 A0A1W2PRS3 328 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 KIR3DP1A8MWS1 328 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 C11orf94C9JXX5 98 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 COX7A2P2O60397 106 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 CLEC3BP05452 202 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 SP1P08047 785 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 RPL11P62913 178 aaKnown RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 SLC35B1P78383 322 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 RTL8BQ17RB0 113 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 C10orf128Q5T292 105 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 RNASEKQ6P5S7 137 aaKnown RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 PPP1R32Q7Z5V6 425 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 C11orf42Q8N5U0 333 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 TAF15Q92804 592 aaKnown RBP eCLIP5.89□□□□□ -1.473e-6■□□□□ 9.1
NEDD9-216ENST00000620854 RAB24Q969Q5 203 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 OR2H1Q9GZK4 316 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 PRO3102Q9H379 93 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 TMEM38BQ9NVV0 291 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 SEMA5BQ9P283 1151 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 ATP23Q9Y6H3 246 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 NTN3O00634 580 aaPredicted RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 LILRA1O75019 489 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 NDUFB4O95168 129 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 IGKV1-39P01597 117 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 IGKV1D-39P04432 117 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 RFPL3SP0C7P2 107 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 CT45A10P0DMU9 189 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 G6PCP35575 357 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 CNN1P51911 297 aaKnown RBP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 SUB1P53999 127 aaKnown RBP eCLIP5.89□□□□□ -1.47
NEDD9-216ENST00000620854 OR5D13Q8NGL4 314 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 VN1R17PQ8TDU5 208 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 CORO2AQ92828 525 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 TMEM54Q969K7 222 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 PPP1R14DQ9NXH3 145 aa5.89□□□□□ -1.47
NEDD9-216ENST00000620854 TRAV38-1A0A0B4J264 116 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 RHBDL1O75783 438 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 NAPSAO96009 420 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 C1QTNF9P0C862 333 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 LGALS4P56470 323 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 SLC25A53Q5H9E4 307 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 DMRTA1Q5VZB9 504 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 DPPA3Q6W0C5 159 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 BLNKQ8WV28 456 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 ZDHHC16Q969W1 377 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 OR2W1Q9Y3N9 320 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 IGLV3-12A0A075B6K2 115 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 DUXBA0A1W2PPF3 345 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 DLL1O00548 723 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 KBTBD11O94819 623 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 HRASP01112 189 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 GCGP01275 180 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 IGKV1-5P01602 117 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 CRISP2P16562 243 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 CHRNB4P30926 498 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 UCNP55089 124 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 TFF3Q07654 80 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 MRPL54Q6P161 138 aaKnown RBP5.88□□□□□ -1.47
NEDD9-216ENST00000620854 MRPL14Q6P1L8 145 aaKnown RBP5.88□□□□□ -1.47
NEDD9-216ENST00000620854 SLC24A4Q8NFF2 622 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 OR8G5Q8NG78 346 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 SGMS2Q8NHU3 365 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 DTD1Q8TEA8 209 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 LRRC29Q8WV35 223 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 C10orf35Q96D05 121 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 TECTBQ96PL2 329 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 WDR61Q9GZS3 305 aaKnown RBP5.88□□□□□ -1.47
NEDD9-216ENST00000620854 HES4Q9HCC6 221 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 TMEM242Q9NWH2 141 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 H0Y980 276 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 ZNF253O75346 499 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 HPRT1P00492 218 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 CSN3P07498 182 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 OR5I1Q13606 314 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 PCSK4Q6UW60 755 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 CYP2G1PQ6ZSU1 146 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 FGFRL1Q8N441 504 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 RBM14Q96PK6 669 aaKnown RBP5.88□□□□□ -1.47
NEDD9-216ENST00000620854 HSD17B10Q99714 261 aaKnown RBP5.88□□□□□ -1.47
NEDD9-216ENST00000620854 TMEM147Q9BVK8 224 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 PLSCR2Q9NRY7 297 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 NAGKQ9UJ70 344 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 POLR3KQ9Y2Y1 108 aaPredicted RBP5.88□□□□□ -1.47
NEDD9-216ENST00000620854 GOLT1BQ9Y3E0 138 aa5.88□□□□□ -1.47
NEDD9-216ENST00000620854 ATG2AQ2TAZ0 1938 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms