RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 KCNE1BA0A087WTH5 132 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 CX3CL1P78423 397 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 CEACAM21Q3KPI0 293 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 C16orf92Q96LL3 132 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 PSG9Q00887 426 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 Q5BKY6 102 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 COQ2Q96H96 371 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 GNB1LQ9BYB4 327 aa13.02□□□□□ -0.32
COL5A1-208ENST00000618395 PLPP3O14495 311 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 SEMA5BQ9P283 1151 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 ZNF205O95201 554 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 AMBPP02760 352 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 SRP19P09132 144 aaKnown RBP13.02□□□□□ -0.33
COL5A1-208ENST00000618395 PNLIPP16233 465 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 MAFAQ8NHW3 353 aaPredicted RBP13.02□□□□□ -0.33
COL5A1-208ENST00000618395 MPC1Q9Y5U8 109 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 C8orf88P0DMB2 117 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 GABRG2P18507 467 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 FAM53BQ14153 422 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 YAE1D1Q9NRH1 226 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 ERG28Q9UKR5 140 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 CNOT1A5YKK6 2376 aaKnown RBP13.02□□□□□ -0.33
COL5A1-208ENST00000618395 WNK3Q9BYP7 1800 aa13.02□□□□□ -0.33
COL5A1-208ENST00000618395 IGKV6D-21A0A0A0MT36 114 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 CA11O75493 328 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 TBX6O95947 436 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 CHCHD1Q96BP2 118 aaKnown RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 NXPH1P58417 271 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 SSBP3Q9BWW4 388 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 ZNF236Q9UL36 1845 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 GZMHP20718 246 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 CAPZBP47756 277 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 OR4A5Q8NH83 315 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 KISS1RQ969F8 398 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 BCORQ6W2J9 1755 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 SPTAN1Q13813 2472 aaKnown RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 TDGF1P3P51864 188 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 MIC13Q5XKP0 118 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 MRPL32Q9BYC8 188 aaKnown RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 IGHV3-20A0A0C4DH32 117 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 FAM157AC9JC47 383 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 EML6Q6ZMW3 1958 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 IGKV3-7A0A075B6H7 116 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 HIGD1CA8MV81 97 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 LINC01387J3KSC0 135 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 MLNRO43193 412 aa13.01□□□□□ -0.33
COL5A1-208ENST00000618395 MORN3Q6PF18 240 aaPredicted RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 MRPS18AQ9NVS2 196 aaKnown RBP13.01□□□□□ -0.33
COL5A1-208ENST00000618395 BTAF1O14981 1849 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 MVB12AQ96EY5 273 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 HCFC1R1Q9NWW0 138 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 VSIG8P0DPA2 414 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 FOXF1Q12946 379 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 Q6AWC8 147 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 HES7Q9BYE0 225 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 LPAL2Q16609 132 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 RPL36A-HNRNPH2H7BZ11 118 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 ZNF56Q15929 161 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 KIR3DL3Q8N743 410 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 ST6GALNAC2Q9UJ37 374 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 RNPS1Q15287 305 aaKnown RBP13□□□□□ -0.33
COL5A1-208ENST00000618395 LAMTOR1Q6IAA8 161 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 CD1AP06126 327 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 ZNF32P17041 273 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 CXorf66Q5JRM2 361 aaPredicted RBP13□□□□□ -0.33
COL5A1-208ENST00000618395 GPR132Q9UNW8 380 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 KLKB1P03952 638 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 LHX2P50458 406 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 CLDND2Q8NHS1 167 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 RNASEH2CQ8TDP1 164 aaKnown RBP13□□□□□ -0.33
COL5A1-208ENST00000618395 C5orf66Q9H5L9 145 aa13□□□□□ -0.33
COL5A1-208ENST00000618395 NXT2Q9NPJ8 142 aaKnown RBP13□□□□□ -0.33
COL5A1-208ENST00000618395 K7ESM1 405 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 M0R2P5 195 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 GPR6P46095 362 aaPredicted RBP12.99□□□□□ -0.33
COL5A1-208ENST00000618395 RCC1LQ96I51 464 aaKnown RBP12.99□□□□□ -0.33
COL5A1-208ENST00000618395 TMEM56-RWDD3S4R434 201 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 TOPAZ1Q8N9V7 1692 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 CDIPTO14735 213 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 ZNF645Q8N7E2 425 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 SLC37A2Q8TED4 501 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 TMUB1Q9BVT8 246 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 CXXC4Q9H2H0 198 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 SDF2L1Q9HCN8 221 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 TMEM258P61165 79 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 GFI1BQ5VTD9 330 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 C2orf82Q6UX34 121 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 STPG3Q8N7X2 389 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 METTL26Q96S19 204 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 VKORC1Q9BQB6 163 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 A0A1W2PRD5 423 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 A0A1W2PRF3 423 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 A0A1W2PRM7 423 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 A8MWP6 167 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 IL2RAP01589 272 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 FOXL2P58012 376 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 RRN3P1Q2M238 152 aa12.99□□□□□ -0.33
COL5A1-208ENST00000618395 DENND4AQ7Z401 1863 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms