RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 FGFRL1Q8N441 504 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 OR1L8Q8NGR8 309 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 THYN1Q9P016 225 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 ALPK3Q96L96 1907 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.74□□□□□ -0.53
CIITA-213ENST00000618327 H3BQ15 152 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 J3QR06 171 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 ZNF273Q14593 569 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 FUT9Q9Y231 359 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 SMIM17P0DL12 118 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 PPIAL4GP0DN37 164 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 MMDQ15546 238 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 IGFL3Q6UXB1 125 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
CIITA-213ENST00000618327 SPSB4Q96A44 273 aa11.74□□□□□ -0.53
CIITA-213ENST00000618327 DEDDO75618 318 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 MBPP02686 304 aaPredicted RBP11.73□□□□□ -0.53
CIITA-213ENST00000618327 GAPDHP04406 335 aaKnown RBP11.73□□□□□ -0.53
CIITA-213ENST00000618327 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
CIITA-213ENST00000618327 ZP1P60852 638 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 HLA-DRB5Q30154 266 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 Q56UQ5 140 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 LYRM7Q5U5X0 104 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 DRAM1Q8N682 238 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 ANAPC16Q96DE5 110 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 VAX2Q9UIW0 290 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 PAM16Q9Y3D7 125 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 IGKV1-12A0A0C4DH73 117 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 K7ERU9 68 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 M0R2Z0 102 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 SNCGO76070 127 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 IGKV1D-12P01611 117 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 TMEM187Q14656 261 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 TMEM30BQ3MIR4 351 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 ELOVL1Q9BW60 279 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 SLC25A15Q9Y619 301 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 ZNF207O43670 478 aaKnown RBP11.73□□□□□ -0.53
CIITA-213ENST00000618327 NMBP08949 121 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 NPY1RP25929 384 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 OR10J1P30954 320 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 MC5RP33032 325 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 PPOXP50336 477 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 CXorf66Q5JRM2 361 aaPredicted RBP11.73□□□□□ -0.53
CIITA-213ENST00000618327 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 FAM216BQ8N7L0 139 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 DCAF16Q9NXF7 216 aa11.73□□□□□ -0.53
CIITA-213ENST00000618327 RALYQ9UKM9 306 aaKnown RBP11.73□□□□□ -0.53
CIITA-213ENST00000618327 A0A0A6YYD4 124 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 FAM74A7A6NL05 159 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 RAB24Q969Q5 203 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 KIAA1549LQ6ZVL6 1849 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 OTOGLQ3ZCN5 2332 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 SRSF10O75494 262 aaKnown RBP11.72□□□□□ -0.53
CIITA-213ENST00000618327 TMEM97Q5BJF2 176 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 MRPL30Q8TCC3 161 aaKnown RBP11.72□□□□□ -0.53
CIITA-213ENST00000618327 GPR146Q96CH1 333 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 PARP11Q9NR21 331 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 OR51B2Q9Y5P1 312 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 BTCP35070 178 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 PLSCR2Q9NRY7 297 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 C11orf94C9JXX5 98 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 CSN3P07498 182 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 TCL1AP56279 114 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 FAM166AQ6J272 317 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 OR13A1Q8NGR1 328 aa11.72□□□□□ -0.53
CIITA-213ENST00000618327 IGKV1-27A0A075B6S5 117 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 A0A0G2JNJ9 132 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 OR2A4O95047 310 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 SEC11BP0C7V7 166 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 MMP9P14780 707 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 FAM209BQ5JX69 171 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 BLNKQ8WV28 456 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 OR2A7Q96R45 310 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 RASL11BQ9BPW5 248 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 Q9UFV3 132 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 HILPDAQ9Y5L2 63 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 F12P00748 615 aaPredicted RBP11.71□□□□□ -0.53
CIITA-213ENST00000618327 ARF6P62330 175 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 OR9G1Q8NH87 305 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 TP53RKQ96S44 253 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 WASHC3Q9Y3C0 194 aa11.71□□□□□ -0.53
CIITA-213ENST00000618327 LDLRAD4O15165 306 aa11.71□□□□□ -0.54
CIITA-213ENST00000618327 ATP5J2P56134 94 aa11.71□□□□□ -0.54
CIITA-213ENST00000618327 OR11H4Q8NGC9 324 aa11.71□□□□□ -0.54
CIITA-213ENST00000618327 PLPPR1Q8TBJ4 325 aa11.71□□□□□ -0.54
CIITA-213ENST00000618327 ERVH48-1M5A8F1 160 aa11.71□□□□□ -0.54
CIITA-213ENST00000618327 Q5BKY6 102 aa11.71□□□□□ -0.54
CIITA-213ENST00000618327 ZCCHC24Q8N2G6 241 aaKnown RBP11.71□□□□□ -0.54
CIITA-213ENST00000618327 ESPL1Q14674 2120 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 PRSS1P07477 247 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 OR4F17Q8NGA8 305 aa11.7□□□□□ -0.54
CIITA-213ENST00000618327 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms